Showing : gosim • reset
1
vote
1
reply
970
views
GoSemSim - function mgeneSim() is resulting in similarity matrix without 1s on diagonal
GOSim GOSemSim
updated 2.2 years ago by ▴ 760 • written 2.2 years ago by ▴ 10
0
votes
1
reply
950
views
I want to convert the go enrichment result to a data frame (tidy data)with two column which one is the gene symbol and the other is go term. Any one…
GO.db GOfuncR GO GOSim goProfiles
updated 2.5 years ago by ▴ 780 • written 2.5 years ago by • 0
3
votes
3
replies
1.1k
views
compute similarities of GOTerms with GOSim in non-human species
GOSim
updated 6.5 years ago by ▴ 760 • written 6.5 years ago by ▴ 10
0
votes
1
reply
1.7k
views
Normalization of specificity level (level of depth) of GO terms dataset
gosim gosemsim
updated 8.1 years ago by ▴ 760 • written 9.5 years ago by ▴ 10
0
votes
0
replies
1.2k
views
GOSim Problem
Yeast Organism GOSim Yeast Organism GOSim
12.5 years ago Pablo Andretta Jaskowiak ▴ 10
0
votes
0
replies
966
views
Problem while working with GOSim package
GOSim GOSim
12.6 years ago ANIRBAN BHAR ▴ 60
0
votes
2
replies
2.3k
views
GOSim yeast
GO Yeast GOSim GO Yeast GOSim
updated 8.1 years ago by • 0 • written 12.9 years ago by ★ 13k
0
votes
2
replies
1.6k
views
Simple GO pie and GOSim install error
GO Organism biomaRt GOSim GO Organism biomaRt GOSim
updated 13.6 years ago by ▴ 40 • written 13.6 years ago by ★ 7.2k
0
votes
0
replies
1.4k
views
Simple GO pie and GOSim install error
GO Organism biomaRt GOSim GO Organism biomaRt GOSim
13.7 years ago Olivier Lucas ▴ 40
0
votes
3
replies
1.4k
views
Query Gene Ontology
GOSim GOSim
updated 13.9 years ago by ★ 13k • written 13.9 years ago by ▴ 10
0
votes
1
reply
1.4k
views
Gene ID of yeast in GOSemSim and other GO related package may need update
Annotation GO Yeast biomaRt GOSemSim GOSim Annotation GO Yeast biomaRt GOSemSim GOSim
updated 15.6 years ago by ★ 7.2k • written 15.6 years ago by ▴ 20
11 results • Page 1 of 1
Recent ...
Replies
Comment: blockwiseModule crashes in the end and doesn't generate modules by drivingdirectionsonline • 0
Solution: The error is likely due to a conflicting cor() function from another package (like psych). Restart R, run blockwiseModules() befo…
Comment: DeSeq Strategies for run to run Replication by Michael Love 43k
You shouldn't need to run `DESeq` on the test data, or manually compute normalization factors. ``` dds_test <- ... # create object dds_te…
Answer: Feature Counts - potential bug with outfile.jcounts by Wei Shi ★ 3.6k
We have made significant changes to how featureCounts annotates junctions detected in read mapping results. These updates are included in t…
Comment: How to perform batch correction on scRNA-seq with confounding plate effects? by 瑞宏 • 0
I would like to share my own understanding: in single-cell RNA sequencing (scRNA-seq), batch correction is solely intended to identify the …
Comment: DiffBind can't find a DAR by Mengjun • 0
Additionally, i checked my bigwig in igv, it shows that the ctrl_1 is more like ko_1, and ctrl_2's track is more like ko_2's track. Did an…
Votes
Comment: Differential expression analysis using two TCGA datasets
C: Annotating HTA 2.0 genes
C: Annotating HTA 2.0 genes
A: Annotating HTA 2.0 genes
A: Annotating HTA 2.0 genes
Awards • All
Popular Question to Mengjun • 0
Popular Question to James W. MacDonald 68k
Popular Question to shepherl 4.1k
Popular Question to Dario Strbenac ★ 1.6k
Popular Question to matthew • 0
Locations • All
Switzerland, 19 minutes ago
WEHI, Melbourne, Australia, 1 hour ago
United States, 1 hour ago
India, 1 hour ago
The city by the bay, 2 hours ago
Traffic: 795 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6