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gostats
•
reset
0
votes
0
replies
1.1k
views
KEGGgraph ??
Pathways
GO
GOstats
keggorth
KEGGgraph
Pathways
GO
GOstats
keggorth
KEGGgraph
17.1 years ago
Paul Evans
▴ 180
0
votes
1
reply
1.0k
views
Gene ontology Id number to amigo link
GO
GOstats
GO
GOstats
updated 17.1 years ago by
Sean Davis
21k • written 17.1 years ago by
Tim Smith
★ 1.1k
0
votes
0
replies
903
views
Post hyperGTest : drawing GO graphs
GO
Yeast
GOstats
topGO
GO
Yeast
GOstats
topGO
17.1 years ago
balag Ganesan
▴ 140
0
votes
5
replies
1.9k
views
Encountering error when using GOstats package
GO
ath1121501
GOstats
GO
ath1121501
GOstats
updated 17.1 years ago by
Vincent J. Carey, Jr.
6.7k • written 17.1 years ago by
Rich Savage
▴ 60
0
votes
0
replies
1.1k
views
Ensembl IDs 2 GO term enrichment --> simple solution without biomart? ( I can't install it because of RCurl)
Annotation
GO
Cancer
GOstats
biomaRt
Annotation
GO
Cancer
GOstats
biomaRt
17.1 years ago
Emmanuel Levy
▴ 270
0
votes
1
reply
1.2k
views
Ensembl IDs 2 GO term enrichment --> simple solution withoutbiomart? ( I can't install it because of RCurl)
GO
GOstats
biomaRt
GO
GOstats
biomaRt
17.1 years ago
michael watson IAH-C
★ 3.4k
0
votes
8
replies
2.6k
views
Ensembl IDs 2 GO term enrichment --> simple solution without biomart? ( I can't install it because of RCurl)
GO
GOstats
biomaRt
GO
GOstats
biomaRt
updated 17.1 years ago by
rgentleman
★ 5.5k • written 17.1 years ago by
Emmanuel Levy
▴ 270
0
votes
4
replies
1.7k
views
Gostats with Yeast annotation
Annotation
GO
Yeast
GOstats
Annotation
GO
Yeast
GOstats
updated 17.3 years ago by
Marc Carlson
★ 7.2k • written 17.3 years ago by
Alex Gutteridge
▴ 650
0
votes
1
reply
790
views
error when using GOstats with AnnBuilder built package
Annotation
GO
GOstats
oligo
Annotation
GO
GOstats
oligo
updated 17.3 years ago by
Marc Carlson
★ 7.2k • written 17.3 years ago by
Johan Lindberg
▴ 270
0
votes
2
replies
1.5k
views
affycoretools vennSelect problem
GO
Survival
annotate
genefilter
affy
graph
gcrma
annaffy
RBGL
GOstats
biomaRt
affyio
updated 17.4 years ago by
James W. MacDonald
68k • written 17.4 years ago by
PeadarÓGaora
▴ 30
0
votes
4
replies
1.5k
views
lumiHumanAll.db, GOstats
Clustering
GOstats
Clustering
GOstats
updated 17.4 years ago by
Wei Shi
★ 3.6k • written 17.4 years ago by
Al Ivens
▴ 270
0
votes
5
replies
1.7k
views
GOstats with yeast2
yeast2
GOstats
yeast2
GOstats
updated 17.4 years ago by
rgentleman
★ 5.5k • written 17.4 years ago by
Sebastien Gerega
▴ 370
0
votes
2
replies
1.2k
views
lumi, lumiHumanV2 and GOstats
GO
lumiHumanV2
GOstats
lumi
GO
lumiHumanV2
GOstats
lumi
updated 17.4 years ago by
James W. MacDonald
68k • written 17.4 years ago by
Al Ivens
▴ 270
0
votes
1
reply
2.4k
views
problem installing package GOstats
GOstats
GOstats
updated 17.4 years ago by
James W. MacDonald
68k • written 17.4 years ago by
Artur Veloso
▴ 340
0
votes
5
replies
3.4k
views
Help using ENSMUSG ids in GOstats
Microarray
Pathways
GOstats
Microarray
Pathways
GOstats
updated 17.5 years ago by
rgentleman
★ 5.5k • written 17.5 years ago by
John Reid
▴ 30
0
votes
1
reply
1.5k
views
hyperGTest Error in sqliteExecStatement...
GO
hgu95av2
GOstats
GO
hgu95av2
GOstats
updated 17.5 years ago by
rgentleman
★ 5.5k • written 17.5 years ago by
Christopher Brown
▴ 10
0
votes
0
replies
947
views
GOstats gene set size selection
Microarray
GO
GOstats
Category
Microarray
GO
GOstats
Category
17.5 years ago
alex lam RI
▴ 30
0
votes
1
reply
1.2k
views
obtaining genes responsible for over-representation of GO term - GOstats
GOstats
GOstats
updated 17.5 years ago by
James W. MacDonald
68k • written 17.5 years ago by
Srinivas Iyyer
▴ 600
0
votes
2
replies
1.2k
views
GOstats gene set size selection
GO
GOstats
GO
GOstats
updated 17.5 years ago by
rgentleman
★ 5.5k • written 17.5 years ago by
alex lam RI
▴ 30
0
votes
0
replies
1.1k
views
topGO and GOstats conflict
GO
GOstats
topGO
GO
GOstats
topGO
17.6 years ago
Adrian Alexa
▴ 400
0
votes
3
replies
1.8k
views
topGO and GOstats conflict
GO
GOstats
topGO
GO
GOstats
topGO
17.6 years ago
Dick Beyer
★ 1.4k
0
votes
1
reply
979
views
Understanding GOstats
Annotation
GO
affy
GOstats
Annotation
GO
affy
GOstats
updated 17.6 years ago by
James W. MacDonald
68k • written 17.6 years ago by
alex lam RI
▴ 310
0
votes
6
replies
2.8k
views
problem with GOHyperGParams in package Category
Annotation
GO
GOstats
Category
Annotation
GO
GOstats
Category
updated 17.7 years ago by
Tony Chiang
▴ 570 • written 17.7 years ago by
Mark W Kimpel
▴ 830
0
votes
4
replies
1.7k
views
GOstats locked database
GO
Cancer
GOstats
GO
Cancer
GOstats
17.8 years ago
Janet Young
▴ 740
0
votes
2
replies
2.0k
views
Visualizing GOstats HyperGTest results
GO
Visualization
GOstats
GO
Visualization
GOstats
updated 17.8 years ago by
James W. MacDonald
68k • written 17.8 years ago by
Srinivas Iyyer
▴ 600
0
votes
1
reply
753
views
Questions in GOvis.pdf - a GOStats vignette
GOstats
GOstats
updated 17.8 years ago by
Martin Morgan
25k • written 17.8 years ago by
Srinivas Iyyer
▴ 600
0
votes
5
replies
2.0k
views
understanding GOstats p-value
Annotation
GO
Cancer
CGH
GOstats
Annotation
GO
Cancer
CGH
GOstats
updated 17.8 years ago by
Charles Berry
▴ 290 • written 17.8 years ago by
Janet Young
▴ 740
0
votes
3
replies
1.3k
views
Odd isolated problem with GOstats
GO
limma
GOstats
GO
limma
GOstats
updated 17.8 years ago by
Marc Carlson
★ 7.2k • written 17.8 years ago by
Mark W Kimpel
▴ 830
0
votes
2
replies
1.8k
views
biomaRt getBM errors
Annotation
GO
annotate
AnnBuilder
GOstats
biomaRt
Annotation
GO
annotate
AnnBuilder
updated 17.9 years ago by
James W. MacDonald
68k • written 17.9 years ago by
Nathaniel Street
▴ 10
0
votes
4
replies
1.5k
views
Rgraphviz, deprecated imageMap
Rgraphviz
PROcess
GOstats
Rgraphviz
PROcess
GOstats
updated 17.9 years ago by
rgentleman
★ 5.5k • written 17.9 years ago by
Ariel Chernomoretz
▴ 170
0
votes
10
replies
2.1k
views
how to build a GOstats-compatible annotation package for plasmodium falciparum?
Annotation
Yeast
GOstats
Annotation
Yeast
GOstats
updated 18.0 years ago by
Dave Berger
▴ 30 • written 18.0 years ago by
Paul Shannon
★ 1.1k
0
votes
14
replies
3.4k
views
GOStats/RBGL installation error
RBGL
GOstats
RBGL
GOstats
updated 18.0 years ago by
Yongde Bao
▴ 170 • written 18.0 years ago by
Nicolas Servant
▴ 260
0
votes
4
replies
2.0k
views
GOstats install error under Linux Debian
GO
GOstats
GO
GOstats
updated 18.1 years ago by
Marc Carlson
★ 7.2k • written 18.1 years ago by
Thomas Girke
★ 1.7k
0
votes
2
replies
1.4k
views
GOstats - defining the gene universe
GOstats
GOstats
updated 18.1 years ago by
James W. MacDonald
68k • written 18.1 years ago by
Rachael McBride
▴ 20
0
votes
2
replies
1.6k
views
problem with probes2tableBM
Annotation
GO
Survival
hgu133a2
annotate
genefilter
affy
graph
gcrma
matchprobes
GOstats
updated 18.1 years ago by
Steffen
▴ 500 • written 18.1 years ago by
Mayte Suarez-Farinas
▴ 510
0
votes
10
replies
2.3k
views
Problem with invalid GO term in HyperGResult object - NOT solved
GO
Cancer
GOstats
affycoretools
GO
Cancer
GOstats
affycoretools
updated 18.1 years ago by
Jenny Drnevich
★ 2.2k • written 18.1 years ago by
Seth Falcon
★ 7.4k
0
votes
5
replies
2.2k
views
Measuring similarities beween GO terms graphs
Annotation
GO
GOstats
Annotation
GO
GOstats
updated 18.2 years ago by
prsmra01@uniroma2.it
▴ 50 • written 18.2 years ago by
raffaele calogero
▴ 500
0
votes
0
replies
1.2k
views
FDR of enrichment analysis and other questions on GOstats
Cancer
GOstats
GLAD
Cancer
GOstats
GLAD
18.2 years ago
Serge Eifes
▴ 90
0
votes
10
replies
2.6k
views
comparing GO lists
Annotation
GO
Cancer
graph
GOstats
Annotation
GO
Cancer
graph
GOstats
updated 18.3 years ago by
Ana Conesa
▴ 130 • written 18.3 years ago by
rgentleman
★ 5.5k
0
votes
0
replies
1.2k
views
Input for KS test
Genetics
GO
GOstats
Category
topGO
Genetics
GO
GOstats
Category
topGO
18.3 years ago
Ken Termiso
▴ 250
0
votes
1
reply
1.3k
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Cancer
Ruuid
tkWidgets
graph
GOstats
Cancer
Ruuid
tkWidgets
graph
GOstats
updated 18.3 years ago by
Alex
▴ 10 • written 18.3 years ago by
Seth Falcon
★ 7.4k
0
votes
0
replies
1.1k
views
Error loading tcltk for tkWidgets and widgetTools on duo Intel Mac under OS X
Ruuid
tkWidgets
graph
GOstats
Ruuid
tkWidgets
graph
GOstats
18.3 years ago
Michael Parisi
▴ 10
0
votes
7
replies
2.0k
views
Gene Ontology relationships
Cancer
GOstats
Cancer
GOstats
updated 18.4 years ago by
Dick Beyer
★ 1.4k • written 18.4 years ago by
Seth Falcon
★ 7.4k
0
votes
1
reply
760
views
Question about htmlReport() in GOstats package
GO
GOstats
GO
GOstats
updated 18.4 years ago by
Seth Falcon
★ 7.4k • written 18.4 years ago by
Zhu, Dongxiao
▴ 40
0
votes
0
replies
1000
views
problem with hyperGTest function
GO
Cancer
cdf
GOstats
GO
Cancer
cdf
GOstats
18.4 years ago
Seth Falcon
★ 7.4k
0
votes
1
reply
1.2k
views
GOstats v2.2.3 . bug in inducedTermGraph
Annotation
GO
GOstats
Annotation
GO
GOstats
updated 18.4 years ago by
Seth Falcon
★ 7.4k • written 18.4 years ago by
Pierre-Yves Boëlle
▴ 10
0
votes
5
replies
2.5k
views
GOstats, geneCounts and gene universe filtering...
GO
rat2302
probe
GOstats
topGO
GO
rat2302
probe
GOstats
topGO
updated 18.5 years ago by
Seth Falcon
★ 7.4k • written 18.5 years ago by
Jesper Ryge
▴ 110
0
votes
5
replies
2.1k
views
AnnBuilder with custmerized GO annotation
Annotation
GO
GOstats
Annotation
GO
GOstats
updated 18.5 years ago by
Nianhua Li
▴ 870 • written 18.5 years ago by
Xinxia Peng
▴ 120
0
votes
6
replies
1.9k
views
hyperGTest
GO
Cancer
GOstats
Category
GO
Cancer
GOstats
Category
updated 18.5 years ago by
Naomi Altman
★ 6.0k • written 18.5 years ago by
Seth Falcon
★ 7.4k
0
votes
0
replies
2.0k
views
GOstats: hyperGTest function
Cancer
GOstats
Cancer
GOstats
18.5 years ago
Seth Falcon
★ 7.4k
250 results • Page
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Comment: Using DESeq2 for age prediction
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You sure will find online tutorials on regression models / machine learning classifiers. The support site is for help with Bioconductor. Ch…
Comment: Using DESeq2 for age prediction
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picasa1983
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Thanks ! Do you have any idea how to do that ?
Answer: Using DESeq2 for age prediction
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The package has no such inbuilt function but you are free to use the vst (or any normalized) counts to train a regression model or classifi…
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Aaron already answered your question. If you have an HDF5 file, it will be read in as a `TENxMatrix` object, which isn't actually read in -…
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