Bioconductor Gsea

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6.6k

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GSEA GeneSetEnrichment DifferentialExpression

updated 3 months ago by ATpoint ★ 4.1k • written 2.2 years ago by nhaus ▴ 30

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628

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gsea DESeq2

updated 6 months ago by ATpoint ★ 4.1k • written 6 months ago by Grace.Ciabattoni • 0

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364

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fgsea gsea

7 weeks ago • updated 5 weeks ago Gordon • 0

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1.7k

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EGSEA gene set testing vooma limma voom gsea

updated 2 days ago by Chris • 0 • written 7.4 years ago by Pekka Kohonen ▴ 190

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1.3k

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enrichplot GSEA clusterProfiler

updated 6 months ago by Fatemeh • 0 • written 9 months ago by Cen • 0

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997

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GSEA voom limma

updated 10 months ago by Gordon Smyth 50k • written 10 months ago by manuelsokolov • 0

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240

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msigdb gmt GSEA

written 7 weeks ago by Georg • 0

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219

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clusterProfiler annotation gseGO gsea OrgDb

updated 6 weeks ago by Guido Hooiveld ★ 3.9k • written 7 weeks ago by enee ▴ 10

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628

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GSEA fgsea

9 months ago Cen • 0

9 results • Page 1 of 1

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Comment: deseq2 results by swbarnes2 ★ 1.4k

Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …

Comment: Can't post a question containing code? by NATASHA • 0

did you find a solution? I´m having the same problem

Comment: error by NATASHA • 0

Please ignore, i didnt copy all the scrip

Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>