Showing : hgu133a • reset
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annotating genes using KEGG
hgu133a cdf hgu133a cdf
16.6 years ago dhaarini s ▴ 70
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1
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1.5k
views
GOstats: HyperGTest for KEGG
Annotation GO Yeast hgu133a hgu133b hgu133plus2 hgu95a hgu95av2 hgug4110b hgug4112a GO
updated 16.7 years ago by ★ 7.2k • written 16.7 years ago by ▴ 180
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4
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1.9k
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error with ontoCompare (goTools)
GO hgu133a graph goTools GO hgu133a graph goTools
updated 16.7 years ago by ▴ 90 • written 16.7 years ago by ▴ 160
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1.5k
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GOstats: hyperGTest for KEGG with org.Sc.sgd.db
Annotation GO Yeast hgu133a hgu133b hgu133plus2 hgu95a hgu95av2 hgug4110b hgug4112a GO
16.7 years ago Paul Evans ▴ 180
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2
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1.2k
views
hyperGTest
GO hgu133a hgu133plus2 hgu95av2 GO hgu133a hgu133plus2 hgu95av2
updated 17.0 years ago by ★ 5.5k • written 17.0 years ago by ★ 1.2k
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999
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Assess inter-study consistency
GO hgu133a probe GO hgu133a probe
updated 17.1 years ago by ▴ 750 • written 17.1 years ago by ▴ 300
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1
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1.1k
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How to extract log ratios from two color arrays
GO hgu133a maanova GO hgu133a maanova
17.1 years ago Heike Pospisil ▴ 310
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1
reply
945
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combineaffybatch and Subsscript out of bound
hgu133a hgu133a
updated 17.3 years ago by ★ 13k • written 17.3 years ago by ▴ 430
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3
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1.6k
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hgu133a annotation and discontinued Entrez IDs
Annotation hgu133a limma Annotation hgu133a limma
17.3 years ago David Fermin ▴ 20
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2
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1.3k
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Integrating hgu133a and hgu133a2
hgu133a2 hgu133a cdf affy hgu133a2 hgu133a cdf affy
17.4 years ago Chintanu ▴ 310
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1
reply
884
views
Help with sub setting data frame of DE genes
GO hgu133a probe GO hgu133a probe
updated 17.5 years ago by ▴ 730 • written 17.5 years ago by ▴ 300
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3
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2.1k
views
Application of multiple testing correction in the context of using Stouffer's method for combing p-values
Microarray hgu133a probe Microarray hgu133a probe
updated 17.6 years ago by ▴ 340 • written 17.6 years ago by ▴ 300
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2
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RMA of CEL files from different chip types
hgu133a hgu133plus2 hgu133a hgu133plus2
updated 18.1 years ago by ▴ 190 • written 18.1 years ago by ▴ 10
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1.3k
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gcrma problem caused by using updated new CDF and probesequence?
Normalization hgu133a hgu95a cdf probe affy gcrma PROMISE Normalization hgu133a hgu95a
18.1 years ago Yan Zhang ▴ 130
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1
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1.7k
views
combineAffyBatch
hgu133a Biobase matchprobes hgu133a Biobase matchprobes
updated 18.3 years ago by 25k • written 18.3 years ago by ▴ 140
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1
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1.1k
views
hgu133a and gnGNF1Ba
Microarray Annotation hgu133a cdf Biobase affy PROcess Microarray Annotation hgu133a cdf
updated 18.3 years ago by ▴ 830 • written 18.3 years ago by ★ 3.4k
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1
reply
968
views
matching affy ids from hgu95 to hgu133 (or any other combination)
hgu133a matchprobes convert hgu133a matchprobes convert
updated 18.4 years ago by ★ 1.1k • written 18.4 years ago by ▴ 510
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3
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annotation of hgu133a
Annotation hgu133a Annotation hgu133a
updated 18.5 years ago by 21k • written 18.5 years ago by ★ 1.2k
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2
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2.5k
views
KEGG pathways gene list
hgu133a hgu133a
updated 18.5 years ago by ★ 1.2k • written 18.5 years ago by ▴ 600
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0
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1.2k
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question about the value retured by function ontoCompare()
GO hgu133a probe PROcess goTools oligo GO hgu133a probe PROcess goTools oligo
18.6 years ago Paquet, Agnes ▴ 500
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2
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2.0k
views
Memory limit (vector size) o linux 64bit
hgu133a hgu133a
updated 18.7 years ago by 68k • written 18.7 years ago by ▴ 20
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0
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1.3k
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[SPAM?] Bioconductor Digest, Vol 41, Issue 22 (Out of Office)
SNP Microarray Annotation GO Network Clustering Survival Cancer hgu133a cdf probe affy
19.2 years ago Todd Nick ▴ 10
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5
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1.8k
views
Missing chromosomal locations in hgu133a package
hgu133a AnnBuilder safe hgu133a AnnBuilder safe
updated 19.2 years ago by ▴ 870 • written 19.2 years ago by ▴ 60
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998
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breast tissue cel files
hgu133a ArrayExpress hgu133a ArrayExpress
19.3 years ago Rafael A. Irizarry ★ 2.3k
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890
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combined Affybatch and mas5
hgu133a cdf affy matchprobes hgu133a cdf affy matchprobes
19.3 years ago Lewin Eisele ▴ 10
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754
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alternative CDF
hgu133a hgu133plus2 cdf hgu133a hgu133plus2 cdf
19.4 years ago Tarca, Adi ▴ 570
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869
views
problem with moe430a version 1.12.0?
hgu133a hgu133plus2 moe430a moe430b rae230b probe hgu133a hgu133plus2 moe430a moe430b
19.4 years ago MARIA STALTERI ▴ 160
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925
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A questions related to affymetrix chip normalizationfrom multiple platform
hgu133a hgu133b gcrma hgu133a hgu133b gcrma
19.5 years ago Li, Aiguo NIH/NCI ▴ 110
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0
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734
views
MixtureCDF
Cancer hgu133a2 hgu133a cdf PROcess Cancer hgu133a2 hgu133a cdf PROcess
19.7 years ago Jack Zhu ▴ 30
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0
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939
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want to compare hgu133a and hgu133plus2
hgu133a hgu133plus2 affy Resourcerer hgu133a hgu133plus2 affy Resourcerer
20.0 years ago Dick Beyer ★ 1.4k
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1
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1.1k
views
cdfName/annotation variants for hgu133a?
Annotation hgu133a hgu133b Annotation hgu133a hgu133b
updated 20.2 years ago by 68k • written 20.2 years ago by ▴ 40
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1.1k
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filtering for present calls
hgu133a gcrma hgu133a gcrma
updated 20.2 years ago by ▴ 280 • written 20.2 years ago by ▴ 10
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4
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1.7k
views
error with results.summary in simpleaffy
Annotation Cancer hgu133a probe simpleaffy Annotation Cancer hgu133a probe simpleaffy
updated 20.2 years ago by ▴ 160 • written 20.3 years ago by ★ 1.1k
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1
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1.0k
views
common genes between hgu133a and hu6800
Microarray hgu133a hu6800 Microarray hgu133a hu6800
updated 20.3 years ago by ▴ 420 • written 20.3 years ago by ▴ 360
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1
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1.1k
views
affycomp hgu133 assessment error
hgu133a hgu95a affycomp hgu133a hgu95a affycomp
20.3 years ago Ariel Chernomoretz ▴ 380
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1
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899
views
justMAS reliability
hgu133a cdf hgu133a cdf
updated 20.3 years ago by ★ 1.1k • written 20.3 years ago by ▴ 30
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2
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1.1k
views
error with results.summary in simpleaffy
Cancer hgu133a probe Cancer hgu133a probe
20.3 years ago Jack Zhu ▴ 30
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1
reply
1.3k
views
justMAS and mas5
hgu133a cdf simpleaffy hgu133a cdf simpleaffy
updated 20.3 years ago by ★ 1.1k • written 20.3 years ago by ▴ 30
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1
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1.5k
views
affycomp and data.frame
hgu133a probe affycomp hgu133a probe affycomp
20.4 years ago Mohammad Esad-Djou ▴ 520
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3
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1.3k
views
Trouble using GOstats
GO hgu133a Category GO hgu133a Category
updated 20.5 years ago by ★ 5.5k • written 20.5 years ago by ▴ 80
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0
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1.1k
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Please help: AffylmGUI errors (more detail)
Normalization hgu133a affylmGUI ASSIGN Normalization hgu133a affylmGUI ASSIGN
20.7 years ago Aaron Hamilton ▴ 30
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1
reply
1.1k
views
MM > PM intensities
hgu133a hgu133a
updated 20.7 years ago by ★ 13k • written 20.7 years ago by ★ 1.3k
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1
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1.3k
views
combining hgu133a hgu133b
hgu133a hgu133b annotate hgu133a hgu133b annotate
updated 20.9 years ago by ★ 1.8k • written 20.9 years ago by ▴ 250
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1
reply
799
views
non appearing AffyIDs cColor
hgu133a hgu133a
updated 21.0 years ago by ★ 5.5k • written 21.0 years ago by ▴ 250
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1
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1.2k
views
add a gene symbol colums in an exprSet or a matrix / infinite recursion error message
hgu133a hgu133a
updated 21.0 years ago by ▴ 120 • written 21.0 years ago by ★ 5.5k
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0
replies
842
views
add a gene symbol colums in an exprSet or a matrix / infinite recursion error message
hgu133a hgu133a
21.0 years ago Florence Combes ▴ 120
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1
reply
909
views
hgu133aPMID redundancy
Annotation GO hgu133a Annotation GO hgu133a
updated 21.1 years ago by ★ 2.9k • written 21.1 years ago by ▴ 30
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1.1k
views
annotation - 1 probe with 2 UG ??
Transcription Annotation GO hgu133a probe Transcription Annotation GO hgu133a probe
updated 21.1 years ago by ★ 2.9k • written 21.1 years ago by ▴ 300
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1.1k
views
Plotting together data from hgu133a and b
hgu133a hgu133b geneplotter hgu133a hgu133b geneplotter
updated 21.2 years ago by ★ 5.5k • written 21.2 years ago by ▴ 500
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5
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1.3k
views
How to use datapackage homology
hgu133a rae230a hgu133a rae230a
updated 21.2 years ago by ★ 5.5k • written 21.2 years ago by ▴ 110
116 results • Page 2 of 3
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Comment: R course in Boston December 19-20 by eja.gaasa2e.r.m • 0
The upcoming XLSolutions R course in Boston on December 19 20 is a great opportunity to enhance your data skills. Whether you re a beginner…
Answer: Gatins Set error by James W. MacDonald 68k
`GatingSet` isn't a function in `flowCore`. It is however in `flowWorkspace`, which you would need to load first.
Answer: How to model DE for RNA-seq in concordant monozygotic twins? by Gordon Smyth 53k
Your question is more about science than it is about software syntax, and I can't give advice about how to conduct a scientific analysis, n…
Comment: incomplete imputation of missing values with LEA impute() function by Gordon Smyth 53k
Nadia, please tag your question with the name of the package ("LEA") that you are asking about. "impute" is the name of a different Biocond…
Comment: Sharing a collection of datasets in ExperimentHub by Aaron Lun ★ 29k
FYI the **scRNAseq** packages uses a non-ExperimentHub storage platform, see [here](https://github.com/ArtifactDB/gypsum-worker) for more d…
Votes
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
Answer: ordinary t from limma [was: How would I normally compare swirl?]
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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