Biostar Insilicomerging

Showing : insilicomerging • reset

votes

replies

329

views

affy insilicomerging

3.1 years ago pratikshasharma47 • 0

vote

replies

549

views

inSilicoMerging microarray affymetrix microarrays

updated 3.4 years ago by James W. MacDonald 59k • written 3.4 years ago by Adam_M • 0

votes

924

views

insilicomerging error insilicodb expressionset

5.3 years ago andreas.pittroff • 0

votes

replies

988

views

MDSplot geneexpression insilicomerging

updated 6.1 years ago by James W. MacDonald 59k • written 6.1 years ago by Shamim Sarhadi ▴ 20

votes

replies

1.4k

views

inSilicoMerging doubleannotation affymetrix microarrays limma inSilicoDB

6.7 years ago svlachavas ▴ 780

vote

replies

1.8k

views

combine expresiondataset insilicomerging

6.8 years ago alakatos ▴ 120

votes

replies

3.3k

views

insilicomerging batcheffect limma differential gene expression bioconductor

updated 6.9 years ago by Aaron Lun ★ 27k • written 6.9 years ago by svlachavas ▴ 780

votes

replies

664

views

insilicomerging

6.9 years ago carol white ▴ 680

vote

replies

1.2k

views

frma bioconductor batcheffect Primeview insilicomerging

updated 7.1 years ago by Matthew McCall ▴ 830 • written 7.1 years ago by svlachavas ▴ 780

votes

replies

865

views

inSilicoMerging

7.5 years ago Li Liu ▴ 100

votes

945

views

inSilicoMerging inSilicoMerging

updated 8.0 years ago by Quentin De Clerck ▴ 10 • written 8.1 years ago by François Lefebvre ▴ 50

votes

replies

1.8k

views

inSilicoMerging inSilicoMerging

updated 8.8 years ago by Dan Tenenbaum ★ 8.2k • written 8.8 years ago by Li Liu ▴ 100

votes

replies

1.1k

views

Colon hgu133a2 hgu133plus2 limma inSilicoMerging Colon hgu133a2 hgu133plus2 limma

8.9 years ago Ed Siefker ▴ 230

13 results • Page 1 of 1

Recent ...

Replies

Comment: DiffBind GreyListChIP error: Error: BiocParallel errors by ksong • 0

Hello my friends, I have exactly the same issue. May I ask if you have already solve this problem? I have tried `library(BiocParallel) regi…

Comment: cellCounts() function floating point error by Wei Shi ★ 3.3k

Yes we are currently working on generating a small example for cellCounts.

Comment: Separate exogenous from endogenous transcripts using Salmon RNAseq DTU by ksong • 0

Hi Dr Sudbery, yes I found looking at the coverage in IGV helps a lot. I did find some differences between CDS and UTR and between samples.…

Comment: Appropriate pre-processing pipeline for Human Transcriptome Array HTA 2.0 with o by Yang Shi • 0

Hi Prof. James, I'm confused with the procedures used for filtering the unexpressed genes mentioned here. Why is the cutoff based on intron…

Comment: Problem converting transcript to genomic coordinates with Annotation Hub by nattzy94 ▴ 10

Hi Johannes, Sorry to revive an old thread. I am facing the above problem as I am using a custom GTF assembled from in-house RNA-Seq data.…

Votes

Comment: Separate exogenous from endogenous transcripts using Salmon RNAseq DTU

C: Appropriate pre-processing pipeline for Human Transcriptome Array HTA 2.0 with o

Comment: Diffbind dba$binding slot finding Chr21 for an MM10 dataset

Answer: Handling NA values in limma's voom design matrix

Awards • All