Bioconductor Isoformswitchanalyzer

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DESeq2 LongRead DEXSeq IsoformSwitchAnalyzeR RNASeq

updated 7 days ago by Michael Love 41k • written 7 days ago by 09191919 • 0

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143

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IsoformSwitchAnalyzeR

6 weeks ago Henry • 0

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270

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stringtie IsoformSwitchAnalyzeR pfamAnalyzeR gtf

updated 4 months ago by James W. MacDonald 65k • written 5 months ago by sumitra.20 • 0

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302

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IsoformSwitchAnalyzeR satuRn

7 months ago jbono ▴ 10

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1.4k

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salmon IsoformSwitchAnalyzeR tximport RNASeqData

updated 8 months ago by k.vitting.seerup ▴ 120 • written 9 months ago by elva.gypsophila ▴ 10

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630

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IsoformSwitchAnalyzeR

10 months ago venura • 0

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428

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IsoformSwitchAnalyzeR

10 months ago Callum • 0

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371

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Isoform IsoformSwitchAnalyzeR

11 months ago Craig • 0

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1.3k

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dplyr IsoformSwitchAnalyzeR

written 12 months ago by ramon.dslps • 0

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1.7k

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AlternativeSplicing RNASeq IsoformSwitchAnalyzeR gtf

written 20 months ago by bpshtiwan ▴ 10

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2.2k

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isoformswitchanalyzeR rna-seq splice-variants

written 5.1 years ago by saddamhusain77 • 0

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1.2k

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isoformswitchanalyzer isoform differential isoform usage

written 5.4 years ago by A ▴ 40

12 results • Page 1 of 1

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Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0

Thank you for your comment! I'll review my code from top to bottom.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…

Votes

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

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Scholar to James W. MacDonald 65k

Supporter to JKim • 0