Bioconductor Liftover

Showing : liftover • reset

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2.9k

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rtracklayer liftover bioconductor R

updated 6.8 years ago by Michael Lawrence ★ 11k • written 6.8 years ago by m.guelfi • 0

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2.2k

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software error liftOver workflowinstall package installation

updated 7.6 years ago by James W. MacDonald 65k • written 7.6 years ago by JustGettinStarted • 0

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1.7k

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liftover rtracklayer

updated 6.8 years ago by Michael Lawrence ★ 11k • written 6.8 years ago by beausoleilmo • 0

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1.6k

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liftOver rtracklayer

updated 3.3 years ago by James W. MacDonald 65k • written 3.3 years ago by Mikhail Dozmorov ▴ 30

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1.5k

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lifto liftOver

updated 24 months ago by Marcel Ramos 700 • written 2.0 years ago by james.dalgleish • 0

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1.3k

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liftOver

updated 3.5 years ago by shepherl 3.9k • written 3.5 years ago by bluepebbles • 0

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1.3k

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hg19 liftover matrixeqtl DMRcate

updated 5.0 years ago by James W. MacDonald 65k • written 5.0 years ago by yoursbassanio ▴ 10

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1.3k

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rtracklayer export.bw liftover

updated 5.5 years ago by Michael Lawrence ★ 11k • written 5.5 years ago by ang ▴ 20

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1.1k

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rtracklayer liftOver parameters minMatch

updated 6.1 years ago by Michael Lawrence ★ 11k • written 6.1 years ago by Nik dAK ▴ 10

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843

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liftOver

3.5 years ago geneprophet • 0

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511

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liftOver SNP GWASTools

14 months ago bonheur • 0

11 results • Page 1 of 1

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Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Comment: STRINGdb : error with string_db$plot_network() by ninidea • 0

> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…

Comment: maSigPro genes from clusters by anne-laure • 0

Hello It is a litlle bit late but I do not get how to extract the genes from each cluster identified by see.genes(sigs$sig.genes$Day4vs…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

Your code seems ok. Does the vignette produce the same error? [link to STRINGdb R script vignette][1] [1]: https://www.bioconductor.or…

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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Popular Question to Vincent J. Carey, Jr. 6.7k

Popular Question to Koen Van den Berge ▴ 180