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liftover
•
reset
0
votes
0
replies
599
views
Human to mouse SNP conversion
liftOver
SNP
GWASTools
16 months ago
bonheur
• 0
2
votes
2
replies
1.7k
views
broken chain import in liftOver
lifto
liftOver
updated 2.2 years ago by
Marcel Ramos
700 • written 2.2 years ago by
james.dalgleish
• 0
2
votes
3
replies
1.8k
views
liftOver bug, reproducible
liftOver
rtracklayer
updated 3.5 years ago by
James W. MacDonald
66k • written 3.5 years ago by
Mikhail Dozmorov
▴ 30
0
votes
1
reply
1.5k
views
How to convert build 37 to build 38?
liftOver
updated 3.6 years ago by
shepherl
3.9k • written 3.7 years ago by
bluepebbles
• 0
0
votes
0
replies
916
views
liftOver (R-package) how to recognize the "#Partially deleted in new" in the result ???
liftOver
3.7 years ago
geneprophet
• 0
1
vote
3
replies
1.3k
views
DMRcate liftover to grch38
hg19
liftover
matrixeqtl
DMRcate
updated 5.2 years ago by
James W. MacDonald
66k • written 5.2 years ago by
yoursbassanio
▴ 10
0
votes
1
reply
1.3k
views
rtracklayer::Problem with export.bw of GRanges object created by unlisted after liftover from mm9 to mm10 of wig file
rtracklayer
export.bw
liftover
updated 5.7 years ago by
Michael Lawrence
★ 11k • written 5.7 years ago by
ang
▴ 20
0
votes
1
reply
1.2k
views
rtracklayer::liftOver parameters (minMatch)
rtracklayer
liftOver
parameters
minMatch
updated 6.3 years ago by
Michael Lawrence
★ 11k • written 6.3 years ago by
Nik dAK
▴ 10
2
votes
3
replies
3.0k
views
rtracklayer::lifOver one-to-many regions and not match UCSC
rtracklayer
liftover
bioconductor
R
updated 6.9 years ago by
Michael Lawrence
★ 11k • written 6.9 years ago by
m.guelfi
• 0
0
votes
2
replies
1.7k
views
liftOver function in rtracklayer package is not working
liftover
rtracklayer
updated 7.0 years ago by
Michael Lawrence
★ 11k • written 7.0 years ago by
beausoleilmo
• 0
2
votes
10
replies
2.3k
views
Trouble Installing lifOver workflow
software error
liftOver
workflowinstall
package installation
updated 7.8 years ago by
James W. MacDonald
66k • written 7.8 years ago by
JustGettinStarted
• 0
11 results • Page
1 of 1
Recent ...
Replies
Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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Lluís Revilla Sancho
▴ 730
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to
maltethodberg
▴ 180
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to
Michael Love
42k
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to
Leonardo Collado Torres
★ 1.1k
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to
Gordon Smyth
51k
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