Showing : memory problem • reset
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split champ.load for large number of samples
memory problem champ.load
6.0 years ago petra.lenzini • 0
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4
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1.1k
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DESeq2 memory allocation question
deseq2 memory problem
updated 6.0 years ago by 42k • written 6.0 years ago by ▴ 60
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How to handle big data sets (>10GB) in Bioconductor packages?
big data methylmix memory problem
updated 6.2 years ago by 25k • written 6.2 years ago by • 0
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962
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ProcessAmplicons using very little memory on big job?
edgeR processamplicons memory problem
6.3 years ago sdalin • 0
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3
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1.8k
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GAIA package Error: cannot allocate vector of size 852.1 Mb
memory problem gaia
updated 6.9 years ago by ▴ 40 • written 6.9 years ago by • 0
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Problem with memory limit in Rstudio/Windows when importing Affymetrix HTA 2.0 CEL files with oligo R package
oligo hta2.0 affymetrix microarrays memory problem
updated 7.6 years ago by 67k • written 7.6 years ago by ▴ 830
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Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Guido Hooiveld ★ 4.1k
I have contacted NCBI, and meanwhile got an an answer. See below. It turns out that the official, HGNC-approved symbols are present in the…
Comment: Question about using LRT test for time course experiments with DESeq2 by Denise • 0
Not really, we are testing some toxic compounds to identify genes that are activated in response to the toxic exposure. Genes that change o…
Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Adam Marstrand • 0
Hi again, Thank you for the response! Can you expound on why it is not a good idea? I realize that the expression levels/differential expr…
Answer: Combining RNAseq and microarray data using edgeR/limma-voom by James W. MacDonald 67k
No, that's not a good idea at all. You should be doing a meta-analysis with these data rather than trying to combine like that. `GeneMeta` …
Answer: GOstats kegg analysis in wheat - help - none of the objects in the first column by James W. MacDonald 67k
Check the help page for `KEGGFrame`. Your columns are out of order.
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Answer: DecideTest vs topTAGs in edgeR
Comment: DESeq Input from Salmon + tximport/tximeta
Comment: DESeq Input from Salmon + tximport/tximeta
Comment: DESeq Input from Salmon + tximport/tximeta
Answer: DESeq Input from Salmon + tximport/tximeta
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