Showing : memory problem • reset
0
votes
0
replies
693
views
split champ.load for large number of samples
memory problem champ.load
6.0 years ago petra.lenzini • 0
0
votes
4
replies
1.1k
views
DESeq2 memory allocation question
deseq2 memory problem
updated 6.1 years ago by 42k • written 6.1 years ago by ▴ 60
1
vote
2
replies
1.1k
views
How to handle big data sets (>10GB) in Bioconductor packages?
big data methylmix memory problem
updated 6.2 years ago by 25k • written 6.2 years ago by • 0
0
votes
1
reply
974
views
ProcessAmplicons using very little memory on big job?
edgeR processamplicons memory problem
6.4 years ago sdalin • 0
0
votes
3
replies
1.9k
views
GAIA package Error: cannot allocate vector of size 852.1 Mb
memory problem gaia
updated 7.0 years ago by ▴ 40 • written 7.0 years ago by • 0
2
votes
3
replies
1.7k
views
Problem with memory limit in Rstudio/Windows when importing Affymetrix HTA 2.0 CEL files with oligo R package
oligo hta2.0 affymetrix microarrays memory problem
updated 7.6 years ago by 67k • written 7.6 years ago by ▴ 830
6 results • Page 1 of 1
Recent ...
Replies
Comment: CleanUpRNAseq with a GTF that is missing mitochondria annotation data by rcreed • 0
The updated version worked well on my data. Thank you!
Answer: DE analysis on Single cell RNA Seq time course data (using pseudotime) with 5 di by James W. MacDonald 67k
The two contrasts at the bottom are identical but for the sign of the logFC, so you should expect the same results (except for flipped sign…
Comment: Identical samples after deseq2 batch effect removal by Michael Love 42k
Oh, i didn't realize there is another method in the mix here. I would not necessarily trust this "batch correction" method, and suspect o…
Comment: Identifying potentially associated gene set to drug response using GSVA by Kent • 0
Hi @robertc thanks for the reply. I should have explained to you the context first. I am testing over a hundred drugs on patient samples (s…
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification by James W. MacDonald 67k
You can easily answer this question yourself. ``` > library(BiocPkgTools) Loading required package: htmlwidgets > depdf <- buildPkgDe…
Votes
Answer: CleanUpRNAseq with a GTF that is missing mitochondria annotation data
Answer: CleanUpRNAseq with a GTF that is missing mitochondria annotation data
A: TopGO: How to retrieve the gene list related to a GO ID ?
A: Error in DESeqDataSet : some values in assay are not integers
A: correcting the batch effects in Limma and SVA
Awards • All
Scholar to Haibo Liu ▴ 20
Popular Question to Talip ▴ 10
Popular Question to alexandre.blais ▴ 50
Popular Question to Fred Hutch (Recruiting) ▴ 40
Scholar to Gordon Smyth 51k
Locations • All
EMBL Heidelberg, 16 minutes ago
WEHI, Melbourne, Australia, 23 minutes ago
New York City, USA, 54 minutes ago
United States, 1 hour ago
The city by the bay, 2 hours ago
Traffic: 587 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6