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8.9k

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DESeq2 linear model model

updated 3.0 years ago by Michael Love 42k • written 9.5 years ago by andrew.j.skelton73 ▴ 370

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3.0k

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deseq2 model

updated 8.9 years ago by Simon Anders ★ 3.7k • written 8.9 years ago by da.de ▴ 30

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2.3k

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egdeR multiple time points model.matrix differential exon usage model

6.8 years ago heikki.sarin ▴ 10

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2.2k

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limma goodness fit linear model

updated 9.3 years ago by Gordon Smyth 50k • written 9.3 years ago by nonCodingGene ▴ 10

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2.2k

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edgeR edger "glmqlftest()" timecourse model

updated 6.8 years ago by Ryan C. Thompson ★ 7.9k • written 6.8 years ago by heikki.sarin ▴ 10

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2.0k

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limma dose-response linear model model formula

updated 6.4 years ago by James W. MacDonald 65k • written 6.4 years ago by biominer ▴ 10

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1.8k

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deseq2 experimental design timecourse rnaseq model

updated 7.5 years ago by Michael Love 42k • written 7.5 years ago by athief ▴ 20

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1.5k

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EdgeR rank model

6.8 years ago philip.freda • 0

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1.4k

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dexseq rna-seq model.matrix model

updated 6.8 years ago by Michael Love 42k • written 6.8 years ago by heikki.sarin ▴ 10

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1.2k

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dexseq timecourse model.matrix model

6.8 years ago heikki.sarin ▴ 10

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1.1k

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DESeq2 ErrorincheckFullRank(modelMatrix) model

updated 3.5 years ago by Michael Love 42k • written 3.5 years ago by Isabelle • 0

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1.0k

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deseq2 interaction model

updated 3.9 years ago by Michael Love 42k • written 3.9 years ago by aec ▴ 90

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958

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model BatchEffect hidden Design DESeq2

2.5 years ago m.glymenaki • 0

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940

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diffbind blocking model

updated 3.5 years ago by Rory Stark ★ 5.2k • written 4.6 years ago by melnuesch ▴ 10

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907

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Deseq2 model

7.8 years ago jrivera • 0

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722

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DESeq2 LRT Model

updated 2.2 years ago by Michael Love 42k • written 2.2 years ago by JaneDoe • 0

16 results • Page 1 of 1

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Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Patadù ▴ 10

Hi @marcelramos Thanks for the clarification. Yes, I have installed `org.Vdahlaie.eg.db` using the code you and Guido suggested and now i…

Comment: European Bioconductor Conference 2023 planning by angelaesper43 • 0

@Maria Doyle[sexdolltech][1]Hosting EuroBioC provides an excellent opportunity to showcase Bioconductor and computational biology research …

Comment: Ensembl plants at annotationHub? by Johannes Rainer ★ 2.0k

Dear Daniele, for which Ensembl release would you need the data? the most recent is 112, but if you used a different version before it wou…

Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Votes

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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