Showing : mouse4302 • reset
3
votes
2
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1.5k
views
Trouble getting probe ID info from mouse4302.db annotation package with a specific RefSeq ID.
annotationdbi mouse4302 affymetrixchip annotationdata R
updated 8.4 years ago by 65k • written 8.4 years ago by • 0
0
votes
6
replies
1.4k
views
can't instal MetaData package "mouse4302"
Annotation mouse4302 Annotation mouse4302
updated 19.1 years ago by ★ 7.4k • written 19.2 years ago by 50k
0
votes
2
replies
1.0k
views
moe430v2 annotation package?
Annotation GO mouse4302 cdf probe Annotation GO mouse4302 cdf probe
updated 19.0 years ago by ★ 2.9k • written 19.0 years ago by ▴ 30
0
votes
1
reply
835
views
Access to Affy chip annotation data in affylmGUI
mouse4302 affylmGUI mouse4302 affylmGUI
updated 18.3 years ago by ★ 7.4k • written 18.3 years ago by ▴ 10
0
votes
3
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2.5k
views
AFFX-BioB-3_at annotation
hgu133plus2 mouse4302 hgu133plus2 mouse4302
18.1 years ago Wu, Xiwei ▴ 350
0
votes
1
reply
881
views
Annaffy problem loading metadata
mouse4302 annaffy mouse4302 annaffy
18.0 years ago Bornman, Daniel M ▴ 110
0
votes
2
replies
732
views
Question about the appropriate uniververse for GOHyperG or hyperGtable
GO mouse4302 probe GO mouse4302 probe
updated 17.9 years ago by 65k • written 17.9 years ago by ▴ 300
0
votes
0
replies
945
views
mouse4302
Annotation mouse4302 probe affy Annotation mouse4302 probe affy
17.9 years ago Nianhua Li ▴ 870
0
votes
2
replies
956
views
annotation on mouse4302
Annotation mouse4302 Annotation mouse4302
updated 16.6 years ago by ▴ 500 • written 16.6 years ago by ▴ 510
0
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5
replies
1.3k
views
Genefilter parameters for mouse 430 2
Cancer mouse4302 genefilter limma gcrma Cancer mouse4302 genefilter limma gcrma
updated 16.1 years ago by 65k • written 16.1 years ago by ★ 2.0k
0
votes
3
replies
977
views
mouse4302,db_2.0.2 in AffylmGUI
Annotation Cancer mouse4302 affy limma Annotation Cancer mouse4302 affy limma
updated 16.1 years ago by ▴ 450 • written 16.1 years ago by ★ 2.0k
0
votes
4
replies
1.1k
views
mouse4302.db vs mouse 4302
Annotation Cancer mouse4302 Annotation Cancer mouse4302
updated 16.0 years ago by ★ 7.2k • written 16.0 years ago by ★ 2.0k
0
votes
2
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1.1k
views
namespace error with goProfiles package
GO mouse4302 goProfiles GO mouse4302 goProfiles
updated 15.9 years ago by ▴ 20 • written 15.9 years ago by ▴ 300
0
votes
0
replies
866
views
Moe430A and Moe430B join
moe430a moe430b mouse4302 gcrma marray moe430a moe430b mouse4302 gcrma marray
15.8 years ago Matyas Flemr ▴ 10
0
votes
0
replies
802
views
gseattperm return all NA
mouse4302 Category mouse4302 Category
15.5 years ago Saroj Mohapatra ▴ 450
0
votes
2
replies
1.3k
views
Problem with Annotation of Mouse4302.db in simpleaffy
Annotation mouse4302 simpleaffy GLAD Annotation mouse4302 simpleaffy GLAD
updated 15.3 years ago by 65k • written 15.3 years ago by ▴ 40
0
votes
2
replies
943
views
Duplicate probesets in mouse4302
mouse4302 mouse4302
updated 15.2 years ago by ★ 2.4k • written 15.2 years ago by ★ 1.3k
0
votes
0
replies
775
views
[Fwd: Re: Duplicate probesets in mouse4302]
mouse4302 cdf mouse4302 cdf
15.2 years ago Naira Naouar ▴ 40
0
votes
5
replies
2.4k
views
error in ls() unused arguments
mouse4302 affyPLM mouse4302 affyPLM
updated 15.2 years ago by ★ 2.3k • written 15.2 years ago by ▴ 40
0
votes
3
replies
970
views
KEGGHyperGParams variable "mouse4302PATH2EG" was not found
Annotation GO hgu133plus2 moe430b mouse4302 Annotation GO hgu133plus2 moe430b mouse4302
updated 15.0 years ago by ★ 7.2k • written 15.0 years ago by ▴ 170
0
votes
3
replies
1.7k
views
Can BioC still convert exprSet to ExpressionSet?
hgu133a hgu133plus2 mouse4302 convert hgu133a hgu133plus2 mouse4302 convert
updated 15.0 years ago by 25k • written 15.0 years ago by ▴ 100
0
votes
0
replies
820
views
only 9-digit refseq IDs when using custom CDF for mouse4302 array
GO mouse4302 cdf affy GO mouse4302 cdf affy
14.6 years ago Jarek Bryk ▴ 110
0
votes
1
reply
1.1k
views
filtering in GSEABase package
GO hgu95av2 mouse4302 PROcess Category GO hgu95av2 mouse4302 PROcess Category
updated 14.1 years ago by ▴ 610 • written 14.1 years ago by ▴ 190
0
votes
1
reply
904
views
Multiple genes per probeset
Annotation Cancer mouse4302 annaffy ASSIGN Annotation Cancer mouse4302 annaffy ASSIGN
updated 14.0 years ago by 65k • written 14.0 years ago by ★ 2.0k
0
votes
1
reply
807
views
question about CDF file
mouse4302 cdf mouse4302 cdf
updated 13.9 years ago by 21k • written 13.9 years ago by ▴ 10
0
votes
6
replies
1.6k
views
affymetrix annotation
mouse4302 affy mouse4302 affy
updated 13.4 years ago by ▴ 250 • written 13.4 years ago by ▴ 200
0
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0
replies
877
views
affymetrix annotation
Annotation mouse4302 affy Annotation mouse4302 affy
13.3 years ago arne.mueller@novartis.com ▴ 200
0
votes
1
reply
790
views
Biocore Data Team : package mouse4302.db bug
mouse4302 mouse4302
updated 13.1 years ago by ★ 7.2k • written 13.1 years ago by ▴ 30
0
votes
1
reply
3.5k
views
KEGG pathway heat map
mouse4302 limma mouse4302 limma
updated 12.0 years ago by ▴ 10 • written 12.0 years ago by ▴ 30
0
votes
4
replies
1.5k
views
AffyID mapping question
Transcription mouse4302 Transcription mouse4302
updated 11.8 years ago by ★ 7.2k • written 11.8 years ago by ★ 13k
0
votes
3
replies
1.3k
views
mouse4302.db and can't find gene symbol annotation
Annotation mouse4302 probe Annotation mouse4302 probe
updated 11.5 years ago by 65k • written 11.5 years ago by ▴ 350
0
votes
3
replies
1.9k
views
BiomaRt: getLDS keeps returning NULL
mouse4302 biomaRt mouse4302 biomaRt
updated 11.4 years ago by ▴ 10 • written 11.4 years ago by ★ 13k
0
votes
3
replies
2.5k
views
Filtering out duplicate probes in Affy data
Annotation mouse4302 annotate affy Annotation mouse4302 annotate affy
updated 11.3 years ago by 65k • written 11.3 years ago by ▴ 180
0
votes
2
replies
1.2k
views
BiomaRt: getLDS keeps returning NULL
mouse4302 probe affy biomaRt mouse4302 probe affy biomaRt
updated 11.3 years ago by ▴ 540 • written 11.3 years ago by ▴ 110
0
votes
3
replies
1.8k
views
error and warning message with blocked samples with Limma
GO Cancer mouse4302 limma GO Cancer mouse4302 limma
updated 11.1 years ago by 50k • written 11.1 years ago by ★ 2.0k
0
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1
reply
2.3k
views
Limma makeContrasts - incorporating known confounder
mouse4302 limma mouse4302 limma
updated 10.4 years ago by ▴ 610 • written 10.4 years ago by ▴ 10
0
votes
1
reply
1.5k
views
Error message using arrayweights
GO Cancer mouse4302 KEGGREST GO Cancer mouse4302 KEGGREST
updated 10.4 years ago by ▴ 1000 • written 10.4 years ago by ▴ 80
0
votes
4
replies
1.8k
views
Affymetrix mouse 430_2 array - gene expression and annotation
Annotation mouse4302 probe oligo Annotation mouse4302 probe oligo
updated 9.8 years ago by 65k • written 9.8 years ago by ▴ 550
0
votes
2
replies
1.5k
views
Affymetrix mouse 430_2 array - annotation problem
Annotation mouse4302 annotate Annotation mouse4302 annotate
updated 9.8 years ago by 65k • written 9.8 years ago by ▴ 550
0
votes
0
replies
857
views
mouse4302.db mapping discrepancies between as.list() and select()
r mouse4302 gene ontology
8.2 years ago mark614 • 0
0
votes
3
replies
1.1k
views
latest devel GO package not built in R2.0.0
GO mouse4302 affy annaffy GO mouse4302 affy annaffy
updated 19.6 years ago by ★ 2.9k • written 19.6 years ago by ★ 1.4k
0
votes
4
replies
1.3k
views
Guidance to handle .CEL file in R
R .cel fiels microarray mouse4302
5.8 years ago aacharya • 0
42 results • Page 1 of 1
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Comment: Why p value inconsistent when using different number of pathway score? by Chris • 0
Hi Robert, if two conditions don't have hundreds of differential express genes ( in some conditions such as peripheral blood Alzheimer vs n…
Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
Awards • All
Popular Question to Leo Lahti ▴ 40
Scholar to James W. MacDonald 65k
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Scholar to Michael Love 41k
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