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News:
2024 May Institute on computation and statistics for mass spectrometry and proteomics
MSstats
MSstatsTMT
MSstatsShiny
MSstatsPTM
3 months ago
kohler.d
• 0
0
votes
0
replies
420
views
Issues setting background in STRINGdb
STRINGdb
MSstats
10 months ago
samsiljee
• 0
0
votes
0
replies
544
views
Help about MSstats in skyline
Skyline.MS
MSstats
R
4.0 years ago
pokhf123
• 0
0
votes
2
replies
870
views
Memory usage and SWATH2stats
swath
dia
msstats
swath2stats
updated 5.5 years ago by
Peter
• 0 • written 5.5 years ago by
jess.burns
• 0
0
votes
1
reply
952
views
MaxQuant to MSstat question
msstats
5.5 years ago
yasaman.jami
• 0
0
votes
4
replies
1.6k
views
Cannot install and load MSstats package
proteomics
massspectrometry
msstats
updated 6.1 years ago by
Laurent Gatto
1.6k • written 6.1 years ago by
zz298
• 0
2
votes
0
replies
1.2k
views
News:
LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
news
proteomics
course
training
msstats
News
6.3 years ago
mnchoi67
▴ 40
1
vote
0
replies
1.9k
views
News:
May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
bioconductor
training
course
msstats
proteomics
News
6.3 years ago
mnchoi67
▴ 40
1
vote
1
reply
1.0k
views
MSstats changes to dataprocess
MSstats
updated 6.3 years ago by
mnchoi67
▴ 40 • written 6.3 years ago by
nmay
• 0
1
vote
1
reply
1.1k
views
object 'feaMeasurements' not found for MSstats
R
msstats
updated 6.3 years ago by
thx223
• 0 • written 6.4 years ago by
doomloop1
▴ 10
1
vote
1
reply
1.0k
views
MSstats package update
MSstats
updated 6.5 years ago by
shepherl
3.9k • written 6.5 years ago by
tillmann.ruland
• 0
11 results • Page
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Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Votes
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
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