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News: BioCAsia Virtual Meeting, 15-18 October 2020
news conference event News
written 20 months ago by ▴ 1000
2
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323
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News: New Bioconductor Community Advisory Board Members for 2021
bioconductoroversight news community BiocVersion
13 months ago Matthew Ritchie ▴ 1000
4
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1
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1.4k
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News: Join the Bioconductor Community Advisory Board
bioconductoroversight community BiocVersion news
updated 14 months ago by • 0 • written 15 months ago by ▴ 1000
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397
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News: Early career researchers: nominate to present your work at BVCN virtual conference on microbiome research
microbiome news Conference
15 months ago Matthew Ritchie ▴ 1000
0
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1
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455
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News: Community engagement and outreach award
bioconductor bioc2020 award community News
written 23 months ago by 3.1k
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281
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News: SUPPORT SITE UPGRADE TODAY -- PLEASE REFRAIN FROM POSTING
support site News
19 months ago shepherl 3.1k
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3
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DESeq2 multiple groups comparison issues, incorrect log2FC results in a small proportion of genes
deseq2
updated 18 months ago by 36k • written 19 months ago by • 0
1
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2
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717
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News: Final List of Deprecated Packages for Bioc3.12
annotation software experimentdata deprecated News
19 months ago shepherl 3.1k
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290
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News: BridgeDbR devel package upgraded to BridgeDb 3
bridgedbr News
19 months ago egon.willighagen ▴ 10
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1
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431
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News: Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
annotation db0 news release News
19 months ago kayla.interdonato 140
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468
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News: Project-wide Code of Conduct statement for Bioconductor
Coc code conduct Bioconductor News
19 months ago Laurent Gatto 1.5k
3
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806
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News: List of Deprecated Packages for Bioc3.12
annotation software experiment data deprecated News
20 months ago • updated 19 months ago shepherl 3.1k
1
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462
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News: New Package Submission Deadline for Bioc Release 3.12
release new package submission deadline News
20 months ago shepherl 3.1k
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439
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News: Bioconductor Release 3.12 Schedule Posted
packages release deadlines builds News
20 months ago shepherl 3.1k
4
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534
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News: ensembldb EnsDb databases for Ensembl release 101 added to AnnotationHub
EnsDb ensembldb annotation AnnotationHub News
21 months ago Johannes Rainer ★ 1.9k
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448
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News: Ensembl 101 hase been released
Ensembl BioMart News
21 months ago mchakiachvili ▴ 20
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288
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News: James Taylor foundation: scholarships to Biological Data Science 2020 at CSHL
scholarships News
22 months ago Kasper Daniel Hansen 6.5k
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380
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News: New Package Submission Workflow Updates!
new packages submission bioconductor News
updated 10 months ago by • 0 • written 22 months ago by 3.1k
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2
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News: Bioc2020 - Call for BOF/HAK/FAQ Sections
conference bioc2020 talks deadline News
2.1 years ago • updated 23 months ago shepherl 3.1k
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480
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News: Bioc2020 - Call for BOF/HAK/FAQ Sections Still Open
conference bioc2020 talks News
23 months ago shepherl 3.1k
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293
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News: Award Nomination Deadline Monday June 15th!
bioc2020 awards bioconductor recognition News
23 months ago shepherl 3.1k
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272
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News: Scientific or Informatic Technology Advancement Award!
bioconductor bioc2020 awards advancement new technology News
23 months ago shepherl 3.1k
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289
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News: Long-term contribution award
bioc2020 bioconductor lifetime recognition awards News
23 months ago shepherl 3.1k
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News: Documentation Bioconductor Award
bioconductor bioc2020 award recognition documentation News
23 months ago shepherl 3.1k
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278
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News: List of Deprecated Packages for Bioc3.12
deprecated experiment data software annotation News
23 months ago shepherl 3.1k
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299
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News: New Package Bioconductor Award
bioconductor bioc2020 award recognition News
23 months ago shepherl 3.1k
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300
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News: Support Site Bioconductor Award
bioconductor bioc2020 awards recognition News
23 months ago shepherl 3.1k
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269
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News: Bioc2020 - Virtual Conference Registration
bioc2020 conference registration News
23 months ago shepherl 3.1k
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263
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News: Updated annotation packages
annotation news News
23 months ago kayla.interdonato 140
4
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3.2k
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News: Nominations for Bioconductor Awards!
Bioc2020 Bioconductor Awards Recognition News
2.1 years ago • updated 23 months ago shepherl 3.1k
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229
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News: Single Package Builder / New Package Submission
new package build machines infrastructure News
24 months ago shepherl 3.1k
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1
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415
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News: Bioconductor Technical Advisory Board Nominees, 2020
tab News
written 24 months ago by 25k
4
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278
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News: Public Calendar of Events
Bioconductor events News
24 months ago shepherl 3.1k
1
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0
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397
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News: ensembldb EnsDb databases for Ensembl release 100 added to AnnotationHub
ensembl annotation ensembldb News
2.0 years ago Johannes Rainer ★ 1.9k
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385
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News: Issues with annotation packages
annotation news release News
2.0 years ago kayla.interdonato 140
0
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3
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398
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News: Final List of Deprecated Packages for Bioc3.11
software annotation experiment data deprecated News
updated 2.1 years ago by 140 • written 2.1 years ago by 3.1k
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276
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News: Bioconductor 3.11 OrgDb and TxDb packages now available
annotation news release News
2.1 years ago kayla.interdonato 140
1
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0
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271
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News: Ensembl 100 has been released
biomart ensembl e100 mart news News
2.1 years ago Thomas Maurel ▴ 790
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285
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News: Bioconductor 3.11 is Released!
software bioconductor release packages News
2.1 years ago shepherl 3.1k
0
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4
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470
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News: BridgeDb build fails due to website unavailability
bridgedbr News
2.5 years ago • updated 2.1 years ago egon.willighagen ▴ 10
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0
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321
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News: Import Deadlines for RELEASE 3.11
release devel deadline bioconductor News
2.1 years ago shepherl 3.1k
10
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2.1k
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News: Professor James Taylor
in memoriam News
2.1 years ago Martin Morgan 25k
0
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298
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News: Last Day to Submit New Packages for Bioconductor Release 3.11
deadline new submission bioconductor release News
2.1 years ago shepherl 3.1k
2
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321
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News: Bioconductor Community Advisory Board Members
news bioconductor oversight community News
2.1 years ago Matthew Ritchie ▴ 1000
0
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1
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345
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News: New Package and New Docker Image Submission Deadline for Bioc Release 3.11
release package submission docker deadline News
2.2 years ago • updated 2.1 years ago shepherl 3.1k
0
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255
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News: Deadline for devel branch 3.11 to pass R CMD build and R CMD check
release devel bioconductor News
2.1 years ago shepherl 3.1k
0
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238
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News: Bioconductor Release 3.10 Code Freeze Deadline
release deadline bioconductor News
2.1 years ago shepherl 3.1k
0
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0
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232
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News: Bioconductor 3.11 db0s are available
annotation db0 news release News
2.1 years ago kayla.interdonato 140
1
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240
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News: Importing alevin inferential replicates into R with tximport
tximport News
2.2 years ago Michael Love 36k
1
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293
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News: Bioconductor Release 3.11 Schedule Posted
release deadlines builds packages News
2.2 years ago shepherl 3.1k
50 results • Page 1 of 1
Recent ...
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Answer: Robust Multi-array Average could get negative value or not? by James W. MacDonald 59k
After running RMA, your data have been logged, base 2. Any value < 1 will have a negative value. Looking at the data from that GEO submissi…
Comment: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array by Yang Shi • 0
Got that sir, thanks so much!
Comment: UniprotKB AC/ID to Entrez ID Conversion by Guido Hooiveld ★ 3.2k
No, no need to modify `up`. It somehow has to do with the R.BioC version; it works when using the latest versions (R-4.2.0/BioC-3.15), but…
Comment: UniprotKB AC/ID to Entrez ID Conversion by tom.kloter • 0
Thanks a lot for your response! I tried the code in my script and got to the following result: ``` > up <- UniProt.ws(taxId=9606) > up "U…
Comment: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array by Guido Hooiveld ★ 3.2k
Regarding the normalization method (SCAN); I have only used RMA for the reasons James explained in one of your other threads (https://suppo…
Votes
Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
Answer: Print EnhancedVolcano Plot as jpeg or similar in R Notebook
Comment: Print EnhancedVolcano Plot as jpeg or similar in R Notebook
A: coefficient not estimable (limma warning)
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