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News:
European Bioconductor Conference 2023 planning
Europe
Conference
EuroBioC
Events
News
written 21 months ago by
Maria Doyle
▴ 70
0
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0
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1.2k
views
News:
Join the Technical Advisory Board
Bioconductor
News
Organization
14 months ago
Maria Doyle
▴ 70
1
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8
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1.6k
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News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.3 years ago by
shepherl
3.9k
1
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0
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558
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News:
Bioconductor joins GTN Smörgåsbord online training event, May 22-26, 2023!
Training
Bioconductor
Event
Community
News
15 months ago
Maria Doyle
▴ 70
1
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2
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1.5k
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News:
Registrations are now open for BioC Asia 2022
Asia
BioCAsia
Conferences
Events
News
22 months ago • updated 20 months ago
Peter Hickey
▴ 740
2
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0
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1.2k
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News:
BioCAsia Virtual Meeting, 15-18 October 2020
news
conference
event
News
written 3.9 years ago by
Matthew Ritchie
▴ 1000
2
votes
0
replies
953
views
News:
New Bioconductor Community Advisory Board Members for 2021
bioconductoroversight
news
community
BiocVersion
3.3 years ago
Matthew Ritchie
▴ 1000
4
votes
1
reply
2.3k
views
News:
Join the Bioconductor Community Advisory Board
bioconductoroversight
community
BiocVersion
news
updated 3.4 years ago by
aedin
• 0 • written 3.5 years ago by
Matthew Ritchie
▴ 1000
0
votes
0
replies
1.1k
views
News:
Early career researchers: nominate to present your work at BVCN virtual conference on microbiome research
microbiome
news
Conference
3.5 years ago
Matthew Ritchie
▴ 1000
0
votes
1
reply
1.1k
views
News:
Community engagement and outreach award
bioconductor
bioc2020
award
community
News
written 4.1 years ago by
shepherl
3.9k
0
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0
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782
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News:
SUPPORT SITE UPGRADE TODAY -- PLEASE REFRAIN FROM POSTING
support site
News
3.8 years ago
shepherl
3.9k
2
votes
3
replies
1.1k
views
DESeq2 multiple groups comparison issues, incorrect log2FC results in a small proportion of genes
deseq2
updated 3.7 years ago by
Michael Love
42k • written 3.8 years ago by
helenhuang.math
• 0
1
vote
2
replies
1.5k
views
News:
Final List of Deprecated Packages for Bioc3.12
annotation
software
experimentdata
deprecated
News
3.8 years ago
shepherl
3.9k
0
votes
0
replies
799
views
News:
BridgeDbR devel package upgraded to BridgeDb 3
bridgedbr
News
3.8 years ago
egon.willighagen
▴ 10
0
votes
1
reply
1.0k
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News:
Bioconductor 3.12 db0s, OrgDbs and TxDbs now available
annotation
db0
news
release
News
3.8 years ago
kayla.interdonato
▴ 160
1
vote
0
replies
1.0k
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News:
Project-wide Code of Conduct statement for Bioconductor
Coc
code
conduct
Bioconductor
News
3.8 years ago
Laurent Gatto
1.6k
3
votes
0
replies
1.5k
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News:
List of Deprecated Packages for Bioc3.12
annotation
software
experiment data
deprecated
News
3.9 years ago • updated 3.8 years ago
shepherl
3.9k
1
vote
0
replies
1.1k
views
News:
New Package Submission Deadline for Bioc Release 3.12
release
new package
submission
deadline
News
3.8 years ago
shepherl
3.9k
0
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0
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1.1k
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News:
Bioconductor Release 3.12 Schedule Posted
packages
release
deadlines
builds
News
3.9 years ago
shepherl
3.9k
4
votes
2
replies
1.8k
views
News:
ensembldb EnsDb databases for Ensembl release 101 added to AnnotationHub
EnsDb
ensembldb
annotation
AnnotationHub
News
3.9 years ago
Johannes Rainer
★ 2.1k
0
votes
1
reply
1.0k
views
News:
Ensembl 101 hase been released
Ensembl
BioMart
News
3.9 years ago
mchakiachvili
▴ 20
1
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0
replies
863
views
News:
James Taylor foundation: scholarships to Biological Data Science 2020 at CSHL
scholarships
News
4.0 years ago
Kasper Daniel Hansen
★ 6.5k
0
votes
3
replies
1.2k
views
News:
New Package Submission Workflow Updates!
new packages
submission
bioconductor
News
updated 3.0 years ago by
jonathan.dekermanjian
• 0 • written 4.1 years ago by
shepherl
3.9k
1
vote
2
replies
2.6k
views
News:
Bioc2020 - Call for BOF/HAK/FAQ Sections
conference
bioc2020
talks
deadline
News
4.3 years ago • updated 4.1 years ago
shepherl
3.9k
0
votes
0
replies
1.3k
views
News:
Bioc2020 - Call for BOF/HAK/FAQ Sections Still Open
conference
bioc2020
talks
News
4.1 years ago
shepherl
3.9k
0
votes
0
replies
869
views
News:
Award Nomination Deadline Monday June 15th!
bioc2020
awards
bioconductor
recognition
News
4.1 years ago
shepherl
3.9k
0
votes
0
replies
809
views
News:
Scientific or Informatic Technology Advancement Award!
bioconductor
bioc2020
awards
advancement
new technology
News
4.1 years ago
shepherl
3.9k
0
votes
0
replies
864
views
News:
Long-term contribution award
bioc2020
bioconductor
lifetime
recognition
awards
News
4.1 years ago
shepherl
3.9k
0
votes
0
replies
815
views
News:
Documentation Bioconductor Award
bioconductor
bioc2020
award
recognition
documentation
News
4.1 years ago
shepherl
3.9k
0
votes
0
replies
905
views
News:
List of Deprecated Packages for Bioc3.12
deprecated
experiment data
software
annotation
News
4.1 years ago
shepherl
3.9k
0
votes
0
replies
861
views
News:
New Package Bioconductor Award
bioconductor
bioc2020
award
recognition
News
4.1 years ago
shepherl
3.9k
0
votes
0
replies
797
views
News:
Support Site Bioconductor Award
bioconductor
bioc2020
awards
recognition
News
4.1 years ago
shepherl
3.9k
0
votes
0
replies
808
views
News:
Bioc2020 - Virtual Conference Registration
bioc2020
conference
registration
News
4.2 years ago
shepherl
3.9k
0
votes
0
replies
769
views
News:
Updated annotation packages
annotation
news
News
4.2 years ago
kayla.interdonato
▴ 160
4
votes
1
reply
3.9k
views
News:
Nominations for Bioconductor Awards!
Bioc2020
Bioconductor
Awards
Recognition
News
4.3 years ago • updated 4.2 years ago
shepherl
3.9k
0
votes
0
replies
715
views
News:
Single Package Builder / New Package Submission
new package
build machines
infrastructure
News
4.2 years ago
shepherl
3.9k
0
votes
1
reply
912
views
News:
Bioconductor Technical Advisory Board Nominees, 2020
tab
News
written 4.2 years ago by
Martin Morgan
25k
4
votes
0
replies
785
views
News:
Public Calendar of Events
Bioconductor
events
News
4.2 years ago
shepherl
3.9k
1
vote
0
replies
1.2k
views
News:
ensembldb EnsDb databases for Ensembl release 100 added to AnnotationHub
ensembl
annotation
ensembldb
News
4.2 years ago
Johannes Rainer
★ 2.1k
1
vote
1
reply
996
views
News:
Issues with annotation packages
annotation
news
release
News
4.2 years ago
kayla.interdonato
▴ 160
0
votes
3
replies
1.1k
views
News:
Final List of Deprecated Packages for Bioc3.11
software
annotation
experiment data
deprecated
News
updated 4.2 years ago by
kayla.interdonato
▴ 160 • written 4.3 years ago by
shepherl
3.9k
0
votes
0
replies
970
views
News:
Bioconductor 3.11 OrgDb and TxDb packages now available
annotation
news
release
News
4.2 years ago
kayla.interdonato
▴ 160
1
vote
0
replies
846
views
News:
Ensembl 100 has been released
biomart
ensembl
e100
mart
news
News
4.2 years ago
Thomas Maurel
▴ 800
4
votes
0
replies
868
views
News:
Bioconductor 3.11 is Released!
software
bioconductor
release
packages
News
4.2 years ago
shepherl
3.9k
0
votes
4
replies
1.3k
views
News:
BridgeDb build fails due to website unavailability
bridgedbr
News
4.6 years ago • updated 4.3 years ago
egon.willighagen
▴ 10
0
votes
0
replies
940
views
News:
Import Deadlines for RELEASE 3.11
release
devel
deadline
bioconductor
News
4.3 years ago
shepherl
3.9k
10
votes
0
replies
2.8k
views
News:
Professor James Taylor
in memoriam
News
4.3 years ago
Martin Morgan
25k
0
votes
0
replies
917
views
News:
Last Day to Submit New Packages for Bioconductor Release 3.11
deadline
new submission
bioconductor
release
News
4.3 years ago
shepherl
3.9k
2
votes
0
replies
897
views
News:
Bioconductor Community Advisory Board Members
news
bioconductor oversight
community
News
4.3 years ago
Matthew Ritchie
▴ 1000
0
votes
1
reply
1.2k
views
News:
New Package and New Docker Image Submission Deadline for Bioc Release 3.11
release
package submission
docker
deadline
News
4.4 years ago • updated 4.3 years ago
shepherl
3.9k
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Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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