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Issues setting background in STRINGdb
STRINGdb MSstats
3 months ago samsiljee • 0
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Help about MSstats in skyline
Skyline.MS MSstats R
3.4 years ago pokhf123 • 0
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660
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Memory usage and SWATH2stats
swath dia msstats swath2stats
updated 4.9 years ago by • 0 • written 4.9 years ago by • 0
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773
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MaxQuant to MSstat question
msstats
4.9 years ago yasaman.jami • 0
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1.3k
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Cannot install and load MSstats package
proteomics massspectrometry msstats
updated 5.5 years ago by 1.6k • written 5.5 years ago by • 0
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News: LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
news proteomics course training msstats News
5.7 years ago mnchoi67 ▴ 40
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object 'feaMeasurements' not found for MSstats
R msstats
updated 5.7 years ago by • 0 • written 5.8 years ago by ▴ 10
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1.7k
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News: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
bioconductor training course msstats proteomics News
5.7 years ago mnchoi67 ▴ 40
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808
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MSstats changes to dataprocess
MSstats
updated 5.7 years ago by ▴ 40 • written 5.7 years ago by • 0
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1
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847
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MSstats package update
MSstats
updated 5.9 years ago by 3.5k • written 5.9 years ago by • 0
10 results • Page 1 of 1
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Comment: DataFrame Construction With Non-standard Column by Hervé Pagès 16k
SimpleList is a List derivative and List derivatives in general don't need protection. For example, a GRangesList object (which is also a L…
Answer: Deseq2, how to model design for comparing Mutant mouse at age 14 days versus Mu by swbarnes2 ★ 1.3k
The Status grouping you show above is good to use if you want to simply compare one subset of samples to another subset. The ~Genotype +…
Answer: Remove duplicates of colData in TreeSummarizedExperiment by Michael Love 40k
Copying my code from Slack for posterity. James' code is more streamlined for this step I think. ``` # make a dataset that has duplicate s…
Comment: DataFrame Construction With Non-standard Column by James W. MacDonald 63k
Oh, ok. I understand. Technically both should work according to what the help page for `DataFrame` says (both `SimpleList` and `list` have …
Comment: DeSeq2 design fails (full model matrix is less than full rank) by Basti ▴ 720
As recommended, you can only perform ~group. You can use contrasts do perform the comparison AA5 vs FHIN1 (see [DESeq2 vignette][1]), but t…
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Answer: Further analysis after limma regression output
A: collapseReplicates in DESeq2
Answer: DataFrame Construction With Non-standard Column
Steps needed to change design (relevel factors) in DESeq2
Steps needed to change design (relevel factors) in DESeq2
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