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msstats
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Issues setting background in STRINGdb
STRINGdb
MSstats
3 months ago
samsiljee
• 0
0
votes
0
replies
415
views
Help about MSstats in skyline
Skyline.MS
MSstats
R
3.4 years ago
pokhf123
• 0
0
votes
2
replies
660
views
Memory usage and SWATH2stats
swath
dia
msstats
swath2stats
updated 4.9 years ago by
Peter
• 0 • written 4.9 years ago by
jess.burns
• 0
0
votes
1
reply
773
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MaxQuant to MSstat question
msstats
4.9 years ago
yasaman.jami
• 0
0
votes
4
replies
1.3k
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Cannot install and load MSstats package
proteomics
massspectrometry
msstats
updated 5.5 years ago by
Laurent Gatto
1.6k • written 5.5 years ago by
zz298
• 0
2
votes
0
replies
975
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News:
LAST CHANCE: May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
news
proteomics
course
training
msstats
News
5.7 years ago
mnchoi67
▴ 40
1
vote
1
reply
901
views
object 'feaMeasurements' not found for MSstats
R
msstats
updated 5.7 years ago by
thx223
• 0 • written 5.8 years ago by
doomloop1
▴ 10
1
vote
0
replies
1.7k
views
News:
May Institute 2018 - Computation and statistics for mass spectrometry and proteomics at Northeastern University in Boston
bioconductor
training
course
msstats
proteomics
News
5.7 years ago
mnchoi67
▴ 40
1
vote
1
reply
808
views
MSstats changes to dataprocess
MSstats
updated 5.7 years ago by
mnchoi67
▴ 40 • written 5.7 years ago by
nmay
• 0
1
vote
1
reply
847
views
MSstats package update
MSstats
updated 5.9 years ago by
shepherl
3.5k • written 5.9 years ago by
tillmann.ruland
• 0
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Comment: DataFrame Construction With Non-standard Column
by
Hervé Pagès
16k
SimpleList is a List derivative and List derivatives in general don't need protection. For example, a GRangesList object (which is also a L…
Answer: Deseq2, how to model design for comparing Mutant mouse at age 14 days versus Mu
by
swbarnes2
★ 1.3k
The Status grouping you show above is good to use if you want to simply compare one subset of samples to another subset. The ~Genotype +…
Answer: Remove duplicates of colData in TreeSummarizedExperiment
by
Michael Love
40k
Copying my code from Slack for posterity. James' code is more streamlined for this step I think. ``` # make a dataset that has duplicate s…
Comment: DataFrame Construction With Non-standard Column
by
James W. MacDonald
63k
Oh, ok. I understand. Technically both should work according to what the help page for `DataFrame` says (both `SimpleList` and `list` have …
Comment: DeSeq2 design fails (full model matrix is less than full rank)
by
Basti
▴ 720
As recommended, you can only perform ~group. You can use contrasts do perform the comparison AA5 vs FHIN1 (see [DESeq2 vignette][1]), but t…
Votes
Answer: Further analysis after limma regression output
A: collapseReplicates in DESeq2
Answer: DataFrame Construction With Non-standard Column
Steps needed to change design (relevel factors) in DESeq2
Steps needed to change design (relevel factors) in DESeq2
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