Bioconductor Omiccircos

Showing : omiccircos • reset

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OmicCircos

6.7 years ago ch8316f5eyu • 0

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omiccircos rcircos

7.2 years ago mictadlo ▴ 10

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omiccircos seganglepo sim.circos circos

7.3 years ago Didi ▴ 10

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Gene set gene set analysis omiccircos

updated 7.3 years ago by yifangt ▴ 20 • written 9.9 years ago by Peter.Wood • 0

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omiccircos bug hg19 hg18 data

7.6 years ago matthew.bashton • 0

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1.7k

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OmicCircos RCircos

updated 7.7 years ago by bernatgel ▴ 150 • written 7.7 years ago by Radek ▴ 90

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OmicCircos

7.8 years ago Stefan Langenberg • 0

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r omiccircos

7.9 years ago theobroma22 ▴ 10

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omiccircos

8.0 years ago Miss Agnieszka Aleksandra Golicz ▴ 40

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889

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omiccircos rnaseq plants

8.0 years ago Didi ▴ 10

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987

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OmicCircos Zoom

8.0 years ago abmora • 0

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omiccircos

8.3 years ago Shambho • 0

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878

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OmicCircos

8.5 years ago magcj89 ▴ 10

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omiccircos software R bioconductor for genomic data science linkage disequilibrium

updated 8.7 years ago by Hu, Ying NIH/NCI [E] ▴ 50 • written 8.8 years ago by pertille • 0

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OmicCircos chicken

9.0 years ago Gary ▴ 20

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canceR visualization omiccircos

9.6 years ago kmezhoud ▴ 10

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visualization omiccircos News

9.8 years ago Hu, Ying NIH/NCI [E] ▴ 50

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omiccircos

updated 9.8 years ago by Hu, Ying NIH/NCI [E] ▴ 50 • written 10.1 years ago by abdul rawoof ▴ 60

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OmicCircos

updated 9.8 years ago by Hu, Ying NIH/NCI [E] ▴ 50 • written 10.2 years ago by micahgearhart • 0

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graph omiccircos

updated 9.8 years ago by Hu, Ying NIH/NCI [E] ▴ 50 • written 9.8 years ago by wei.shen • 0

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differential gene expression heatmap Circos omiccircos

9.9 years ago Peter.Wood • 0

21 results • Page 1 of 1

Recent ...

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Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k

limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…

Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k

Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…

Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60

Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…

Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k

For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…

Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by xiaofeiwang198266 • 0

Thanks for your reply!

Votes

C: edgeR and lack of counts ID on CPM matrix

A: DESeq2 Following RSEM

A: importing RSEM data into DESeq2

A: Expected counts from RSEM in DESeq2

A: Using RSEM reads for DESeq2

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