Bioconductor Pacbio

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rnaseq data integration single-cell pacbio across species Job

6.5 years ago bgee • 0

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gviz bam pacbio

updated 8.3 years ago by florian.hahne@novartis.com ★ 1.6k • written 8.3 years ago by thackl • 0

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shortread pacbio fastq

updated 6.6 years ago by Martin Morgan 25k • written 6.6 years ago by benjamin.j.callahan ▴ 50

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723

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pacbio isoform

written 21 months ago by lhaiyan3 • 0

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1.8k

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pacbio pbi

6.3 years ago Frocha ▴ 20

5 results • Page 1 of 1

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Comment: Rsubread alignment crashes at 35%, valgrind indicates invalid writes by Yang Liao ▴ 440

Thank you for the additional information! We are currently developing a significantly improved version of `Sublong`. Unfortunately, the old…

Answer: object 'hdac_targets' not found by James W. MacDonald 67k

I believe you missed some steps: ``` ## ----trTargets------------------------------------------------------------- tr_targets <- subse…

Answer: KEGGgraph result difference by alex.pico ▴ 20

I'm not surprised that this fails. Not all GraphNELs nor igraphs are the same, so these chains of conversions are fraught with peril. Assu…

Answer: In the sesame package, what does the estimate output mean from testEnrichment() by James W. MacDonald 67k

It's right there in the output (`Log2(OR)`). It's doing a Fisher's exact test, which returns an odds ratio, and the output is the log odds …

Comment: WGCNA Choosing soft threshold power below R^2 0.8 by Lluís Revilla Sancho ▴ 730

This is not a bioconductor pacakge, but have you considered that something might be off with your data? Do you have enough samples of each …

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C: Usability of ERCC spike-ins in standard RNAseq experiments

A: Usability of ERCC spike-ins in standard RNAseq experiments

A: Using the ERCC spike as a normalization factor for a custom algorithm

Answer: Cannabis and KEGGgraph

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Popular Question to Robert Castelo ★ 3.4k