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pamr
•
reset
0
votes
0
replies
1.3k
views
ComBat covariate bias when building centroid based predictors
combat
combat sva
pamr
limma design matrix
sva
7.1 years ago
jmsendoya
• 0
0
votes
1
reply
1.3k
views
pamr
pamr
pamr
updated 12.8 years ago by
James W. MacDonald
68k • written 12.8 years ago by
mbranham@fcm.uncu.edu.ar
▴ 10
0
votes
2
replies
1.5k
views
pam implementation
pamr
pamr
updated 12.9 years ago by
John Lande
▴ 280 • written 12.9 years ago by
Wolfgang Huber
★ 13k
0
votes
1
reply
1.6k
views
a bug in the function pamr.plotcen()
pamr
pamr
updated 14.4 years ago by
Martin Morgan
25k • written 14.4 years ago by
Alogmail2@aol.com
▴ 90
0
votes
1
reply
2.2k
views
Error in pamr.predict
pamr
pamr
updated 16.5 years ago by
Hervé Pagès
16k • written 16.5 years ago by
Richard Yanicky
▴ 10
0
votes
4
replies
1.5k
views
problem regarding runtime of pamr.cv
pamr
pamr
updated 16.6 years ago by
James W. MacDonald
68k • written 16.6 years ago by
ALok
▴ 170
0
votes
0
replies
1.1k
views
question about pamr.listgenes ....
pamr
pamr
17.2 years ago
ALok
▴ 170
0
votes
0
replies
1.4k
views
pamr.cv function
Cancer
pamr
Cancer
pamr
17.6 years ago
Patricia Greninger
▴ 10
0
votes
1
reply
1.5k
views
problem with pamr.listgenes in pamr package
pamr
pamr
updated 18.4 years ago by
Giovanni Coppola
▴ 250 • written 18.4 years ago by
Alice LE BARS
▴ 10
0
votes
1
reply
1.7k
views
Error of pamr.knnimpute
Microarray
pamr
Microarray
pamr
updated 18.7 years ago by
James W. MacDonald
68k • written 18.7 years ago by
washiot+1@gmail.com
▴ 10
0
votes
1
reply
1.1k
views
magnifying genenames in pamr.plotcen()
pamr
pamr
updated 19.5 years ago by
James W. MacDonald
68k • written 19.5 years ago by
Benjamin Otto
▴ 830
0
votes
0
replies
1.1k
views
pamr package - problem with pamr.cv() function
pamr
pamr
19.6 years ago
Vincent Negre
▴ 30
0
votes
3
replies
1.5k
views
How to write a text file of a pamr.confusion table ?
pamr
pamr
updated 19.9 years ago by
Björn Usadel
▴ 250 • written 19.9 years ago by
Giulio Di Giovanni
▴ 540
0
votes
1
reply
1.3k
views
pamr and samr problems with windowsXP - pop-up windows
pamr
pamr
updated 20.1 years ago by
Seth Falcon
★ 7.4k • written 20.1 years ago by
Giulio Di Giovanni
▴ 540
0
votes
3
replies
1.4k
views
pamr, samr and RWinEdt conficts - New editor req info
pamr
pamr
updated 20.1 years ago by
Seth Falcon
★ 7.4k • written 20.1 years ago by
Giulio Di Giovanni
▴ 540
0
votes
0
replies
1.2k
views
Re: Re: segmentation error in pamr.knnimpute
pamr
impute
pamr
impute
20.4 years ago
Alice Le Bars
▴ 40
0
votes
1
reply
1.0k
views
segmentation error in pamr.knnimpute
pamr
pamr
updated 20.4 years ago by
Seth Falcon
★ 7.4k • written 20.4 years ago by
Alice Le Bars
▴ 40
0
votes
2
replies
1.8k
views
pamr / R graphics recording
pamr
pamr
updated 20.7 years ago by
Min-Han Tan
▴ 40 • written 20.7 years ago by
Katleen De Preter
▴ 130
0
votes
2
replies
2.0k
views
Installation Problem on OS X
GO
geneplotter
graph
Rgraphviz
pamr
globaltest
GO
geneplotter
graph
Rgraphviz
pamr
updated 20.9 years ago by
Marcus Davy
▴ 680 • written 20.9 years ago by
David Rocke
▴ 10
0
votes
1
reply
1.3k
views
Application of PAMR from Affy to spot data
affy
pamr
affy
pamr
updated 21.0 years ago by
rgentleman
★ 5.5k • written 21.0 years ago by
Tan, MinHan
▴ 180
0
votes
6
replies
1.9k
views
pamr Error: each class must have >1 sample
GO
pamr
GO
pamr
updated 21.2 years ago by
Kasper Daniel Hansen
▴ 630 • written 21.2 years ago by
Dick Beyer
★ 1.4k
0
votes
0
replies
917
views
pamr and sample.subset option
pamr
pamr
21.3 years ago
Dr Gyorffy Balazs
▴ 320
0
votes
2
replies
1.5k
views
Hierarchical clustering and shrinking centroids...
Classification
Clustering
pamr
Classification
Clustering
pamr
updated 21.4 years ago by
Stephen Henderson
★ 1.0k • written 21.4 years ago by
Tan, MinHan
▴ 180
0
votes
0
replies
1.4k
views
Problem with PAM using R 1.9.0
pamr
pamr
21.4 years ago
Michelle Kittleson
▴ 10
0
votes
1
reply
1.8k
views
Bioconductor 1.4 released
Proteomics
Annotation
Normalization
GO
Cancer
CGH
pamr
gcrma
gpls
affyPLM
webbioc
bim
updated 21.4 years ago by
Wolfgang Huber
★ 13k • written 21.4 years ago by
A.J. Rossini
▴ 810
0
votes
1
reply
1.5k
views
Bug with R 1.9.0 beta (3/23) and PAMR?
pamr
pamr
updated 21.5 years ago by
Liaw, Andy
▴ 360 • written 21.5 years ago by
Tan, MinHan
▴ 180
0
votes
0
replies
1.0k
views
wee query on pamr.knnimpute
pamr
pamr
21.7 years ago
Aedin Culhane
▴ 310
27 results • Page
1 of 1
Recent ...
Replies
Comment: Help with defining groups
by
Phinney, Brett
▴ 10
I got it working , thank you!!!
Comment: Check removeBatchEffect effectiveness
by
massimo
• 0
I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…
Comment: Error Loading Experiment from SimBenchData Package
by
ksankaran
• 0
Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.
Comment: Streamlining the computing time for MiloDE p-value correction in large dataset?
by
ATpoint
★ 5.0k
Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…
Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes
by
ATpoint
★ 5.0k
Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…
Votes
Comment: Check removeBatchEffect effectiveness
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
Answer: Error Loading Experiment from SimBenchData Package
Comment: incomplete imputation of missing values with LEA impute() function
Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce
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