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parameters
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Found gaps in scan time of file : cut scantime-vector at NA seconds. Error: BiocParallel errors element index: 1, 2, 3, 4, 5, 6 first error: argu…
xcms
adjustRtime
parameters
scantime error
biocparallel error
4.6 years ago
abrsoule
▴ 30
0
votes
4
replies
1.3k
views
Volcano Plot after using Treat Function
Volcano plot
Parameters
updated 6.6 years ago by
Gordon Smyth
50k • written 6.6 years ago by
Sanches
• 0
0
votes
1
reply
1.1k
views
rtracklayer::liftOver parameters (minMatch)
rtracklayer
liftOver
parameters
minMatch
updated 6.1 years ago by
Michael Lawrence
★ 11k • written 6.1 years ago by
Nik dAK
▴ 10
0
votes
1
reply
1.1k
views
How can I compute AIC for MAST hurdle model fitted in the whole dataset?
MAST
AIC calcuation
Parameters
single cell
hurdle model
updated 6 weeks ago by
rproendo
▴ 20 • written 5.2 years ago by
mcalgaro93
• 0
0
votes
1
reply
1.1k
views
More control parameters expected in lpsymphony?
lpsymphony
R
parameters
control
warm start
updated 7.9 years ago by
Wolfgang Huber
★ 13k • written 7.9 years ago by
chiel
• 0
5 results • Page
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Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma
by
Gordon Smyth
50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
In that case both time and treatment are identical things, so choose one and go with it.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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