Bioconductor PlotPCA

Showing : plotPCA • reset

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997

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Rstudio plotPCA DESeq2

16 months ago yee • 0

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1.2k

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plotMA ggplot2 plotPCA DESeq2

updated 18 months ago by Michael Love 43k • written 18 months ago by sara.jacobson • 0

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5.6k

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plotPCA PCA

updated 24 months ago by hediatnani • 0 • written 2.0 years ago by Yijing • 0

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3.3k

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DESeq2 plotPCA

updated 9 months ago by Daniele • 0 • written 3.2 years ago by synat.keam • 0

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plotpca DESeq2

3.2 years ago bjen731 ▴ 10

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plotPCA DESeq2 RUVSeq removebatcheffect()

3.9 years ago elizabethe819 • 0

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1.2k

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DESeq2 RNASeq plotpca

updated 4.2 years ago by Michael Love 43k • written 4.2 years ago by s1760083 • 0

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1.4k

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deseq2 biplot plotpca

updated 5.2 years ago by Michael Love 43k • written 5.2 years ago by ecg1g15 ▴ 30

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829

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deseq2 PlotPCA draw.triple.venn

updated 6.6 years ago by Michael Love 43k • written 6.6 years ago by N. Perera • 0

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851

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deseq2 plotpca

updated 6.6 years ago by Michael Love 43k • written 6.6 years ago by snp31 • 0

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8.1k

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deseq2 plotpca PCa

updated 7.4 years ago by Michael Love 43k • written 7.4 years ago by lirongrossmann ▴ 80

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3.8k

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deseq2 rlog variancestabilizingtransformation plotpca pca

7.5 years ago lirongrossmann ▴ 80

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3.6k

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DESeq2 plotPCA rlog transformation vsd

7.7 years ago Jane Merlevede ▴ 90

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plotPCA deseq2 labels

updated 8.2 years ago by Federico Marini ▴ 180 • written 8.2 years ago by al-ash ▴ 50

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pca plotpca

8.5 years ago marianarochadesouza • 0

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1.8k

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deseq2 plotPCA PCA rna-seq

8.9 years ago newsomew13 • 0

16 results • Page 1 of 1

Recent ...

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Answer: DESeq2 by ATpoint ★ 4.8k

Time courses are often inevitable batches but you should have done the library prep at the same day, just extract RNA per day. If not then …

Comment: Package developing and interoperation with Bioconductor by slizchap • 0

Thank you so much for your answer. This was very useful, I will optimize my functions so they can handle SE objects.

Comment: Package developing and interoperation with Bioconductor by slizchap • 0

Thank you so much for your answer, very useful!

Comment: Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files by Mike Smith ★ 6.6k

Tricky to try and debug this without some example files to work with. Can you provide the output of `traceback()` called immediately after…

Answer: Mismatch between Illumina Mouse Methylation BeadChip annotation and genome brows by James W. MacDonald 68k

The annotation data that is provided for this array is simply a repackaging of data that we get from Illumina, so any apparent inconsistenc…

Votes

Is it possible to speed up VariantAnnotation's rowRanges function when converting to a dataframe?

Answer: Is it possible to speed up VariantAnnotation's rowRanges function when convertin

Comment: ComBat with repeated measures

Answer: Package developing and interoperation with Bioconductor

Answer: CpGs with genomic positions greater than the chromosome size in EPICv2?

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