Bioconductor PlotPCA

Showing : plotPCA • reset

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1.4k

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Rstudio plotPCA DESeq2

2.2 years ago • updated 2.1 years ago yee • 0

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1.7k

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plotMA ggplot2 plotPCA DESeq2

updated 2.3 years ago by Michael Love 43k • written 2.3 years ago by sara.jacobson • 0

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6.4k

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plotPCA PCA

updated 2.8 years ago by hediatnani • 0 • written 2.8 years ago by Yijing • 0

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3.7k

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DESeq2 plotPCA

updated 19 months ago by Daniele • 0 • written 4.0 years ago by synat.keam • 0

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plotpca DESeq2

4.0 years ago bjen731 ▴ 10

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plotPCA DESeq2 RUVSeq removebatcheffect()

4.7 years ago elizabethe819 • 0

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DESeq2 RNASeq plotpca

updated 5.0 years ago by Michael Love 43k • written 5.0 years ago by s1760083 • 0

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1.7k

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deseq2 biplot plotpca

updated 6.0 years ago by Michael Love 43k • written 6.0 years ago by ecg1g15 ▴ 30

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978

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deseq2 PlotPCA draw.triple.venn

updated 7.4 years ago by Michael Love 43k • written 7.4 years ago by N. Perera • 0

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deseq2 plotpca

updated 7.4 years ago by Michael Love 43k • written 7.4 years ago by snp31 • 0

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deseq2 plotpca PCa

updated 8.2 years ago by Michael Love 43k • written 8.2 years ago by lirongrossmann ▴ 80

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deseq2 rlog variancestabilizingtransformation plotpca pca

8.3 years ago lirongrossmann ▴ 80

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DESeq2 plotPCA rlog transformation vsd

8.5 years ago Jane Merlevede ▴ 90

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50k

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plotPCA deseq2 labels

updated 9.0 years ago by Federico Marini ▴ 180 • written 9.0 years ago by al-ash ▴ 50

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pca plotpca

9.3 years ago marianarochadesouza • 0

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deseq2 plotPCA PCA rna-seq

9.7 years ago newsomew13 • 0

16 results • Page 1 of 1

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Comment: Pairwise comparison of multiple groups with different base by ja569116 • 0

Hi @mikelove I have a similar situation, and I feel that I have interpreted the results in the wrong way. In my case I would like to identi…

Comment: Are individual-mouse-based statistics possible in CellChat? by TikTsossakaas33ocissalpc • 0

Questions about comparing groups and statistical significance highlight how data driven thinking matters across fields. In online mobile ga…

Comment: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by ja569116 • 0

Hi @atpoint Thanks for the information. Could you please expand on when to use adjusted p-values vs nominal p-values. My understanding was …

Answer: limpa analysis advice by Gordon Smyth 53k

It is actually very hard to estimate the DPC from observed data, because the curve is function of unobserved intensities rather than a func…

Answer: When to use edgeR or limma by Gordon Smyth 53k

The short answer is that we generally prefer edgeR for applications with lots of small counts and limma for complex designs with random eff…

Votes

Answer: When to use edgeR or limma

A: deseq2 - paired samples in 2 sequencing types with very different library sizes

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Popular Question to Lluís Revilla Sancho ▴ 760