Bioconductor PlotPCA

Showing : plotPCA • reset

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1.4k

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Rstudio plotPCA DESeq2

2.2 years ago yee • 0

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1.8k

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plotMA ggplot2 plotPCA DESeq2

updated 2.4 years ago by Michael Love 43k • written 2.4 years ago by sara.jacobson • 0

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6.4k

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plotPCA PCA

updated 2.9 years ago by hediatnani • 0 • written 2.9 years ago by Yijing • 0

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3.8k

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DESeq2 plotPCA

updated 20 months ago by Daniele • 0 • written 4.0 years ago by synat.keam • 0

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11k

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plotpca DESeq2

4.1 years ago bjen731 ▴ 10

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2.2k

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plotPCA DESeq2 RUVSeq removebatcheffect()

4.8 years ago elizabethe819 • 0

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1.5k

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DESeq2 RNASeq plotpca

updated 5.0 years ago by Michael Love 43k • written 5.0 years ago by s1760083 • 0

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1.7k

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deseq2 biplot plotpca

updated 6.1 years ago by Michael Love 43k • written 6.1 years ago by ecg1g15 ▴ 30

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995

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deseq2 PlotPCA draw.triple.venn

updated 7.4 years ago by Michael Love 43k • written 7.4 years ago by N. Perera • 0

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deseq2 plotpca

updated 7.4 years ago by Michael Love 43k • written 7.4 years ago by snp31 • 0

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8.6k

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deseq2 plotpca PCa

updated 8.3 years ago by Michael Love 43k • written 8.3 years ago by lirongrossmann ▴ 80

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deseq2 rlog variancestabilizingtransformation plotpca pca

8.4 years ago lirongrossmann ▴ 80

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DESeq2 plotPCA rlog transformation vsd

8.6 years ago Jane Merlevede ▴ 90

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50k

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plotPCA deseq2 labels

updated 9.1 years ago by Federico Marini ▴ 180 • written 9.1 years ago by al-ash ▴ 50

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pca plotpca

9.4 years ago marianarochadesouza • 0

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deseq2 plotPCA PCA rna-seq

9.7 years ago newsomew13 • 0

16 results • Page 1 of 1

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Comment: Deseq2 DE analysis of host-pathogen samples (model separately or jointly?) by a2a2ddrhaa • 0

For those taking a break from the lab, the CT777 Game download https://ct7777.pk/ offers a high-performance entry into online mobile gaming…

Answer: Subsetting data verses contrasts [DESeq2]? by ATpoint ★ 5.0k

This has been asked many times before, please search for relevant posts. In short: Generally it is least tedious to not split the data and …

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you so much for your help! will try to proceed with the suggestion

Comment: Bulk RNAseq analysis for by Mariami • 0

Thank you for the explanation. I understand, although at the moment we are limited in our ability to increase N. My concern came from the o…

Answer: Bulk RNAseq analysis for by Gordon Smyth 53k

All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…

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Comment: Are transformed values from rlog /vst log2 normalized counts?

Are transformed values from rlog /vst log2 normalized counts?

Answer: Bulk RNAseq analysis for

Answer: DiffBind differential analysis

Answer: Limma-voom sample weights and impact on DEG numbers

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