Bioconductor Plotpca

Showing : plotpca • reset

votes

replies

361

views

Rstudio plotPCA DESeq2

5 months ago yee • 0

vote

replies

630

views

plotMA ggplot2 plotPCA DESeq2

updated 7 months ago by Michael Love 41k • written 7 months ago by sara.jacobson • 0

votes

replies

3.1k

views

plotPCA PCA

updated 13 months ago by hediatnani • 0 • written 13 months ago by Yijing • 0

votes

replies

2.3k

views

DESeq2 plotPCA

2.3 years ago • updated 2.1 years ago synat.keam • 0

votes

replies

6.4k

views

plotpca DESeq2

2.3 years ago bjen731 ▴ 10

votes

replies

1.4k

views

plotPCA DESeq2 RUVSeq removebatcheffect()

3.0 years ago elizabethe819 • 0

vote

874

views

DESeq2 RNASeq plotpca

updated 3.2 years ago by Michael Love 41k • written 3.2 years ago by s1760083 • 0

votes

replies

1.0k

views

deseq2 biplot plotpca

updated 4.3 years ago by Michael Love 41k • written 4.3 years ago by ecg1g15 ▴ 20

votes

610

views

deseq2 plotpca

updated 5.6 years ago by Michael Love 41k • written 5.7 years ago by snp31 • 0

votes

643

views

deseq2 PlotPCA draw.triple.venn

updated 5.6 years ago by Michael Love 41k • written 5.7 years ago by N. Perera • 0

votes

7.1k

views

deseq2 plotpca PCa

updated 6.5 years ago by Michael Love 41k • written 6.5 years ago by lirongrossmann ▴ 80

votes

replies

3.2k

views

deseq2 rlog variancestabilizingtransformation plotpca pca

6.6 years ago lirongrossmann ▴ 80

votes

replies

3.1k

views

DESeq2 plotPCA rlog transformation vsd

6.8 years ago Jane Merlevede ▴ 90

votes

replies

41k

views

plotPCA deseq2 labels

updated 7.3 years ago by Federico Marini ▴ 150 • written 7.3 years ago by al-ash ▴ 50

votes

replies

973

views

pca plotpca

7.6 years ago marianarochadesouza • 0

votes

replies

1.5k

views

deseq2 plotPCA PCA rna-seq

7.9 years ago newsomew13 • 0

16 results • Page 1 of 1

Recent ...

Replies

Comment: Timecourse RNASeq analysis by Aurora • 0

I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…

Comment: Once again a "Model matrix not full rank" by arfranco ▴ 130

But.. How to run a temporal assay?

Comment: Deseq2 and Normalization of RNA sequencing data by kcarey • 0

Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …

Answer: NEED FOR NESSASORY HELP by Gordon Smyth 50k

Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…

Answer: Gene-by-sample covariates in limma by Gordon Smyth 50k

Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…

Votes

Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

Awards • All