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prostar
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Problems with Prostar v1.26.4 - issue with convert data prior to filtering
Prostar
2.9 years ago
benoit.marchand
• 0
1
vote
5
replies
1.3k
views
Need help for ProStaR Stand-alone install
Prostar
updated 2.6 years ago by
Wang
• 0 • written 3.1 years ago by
benoit.marchand
• 0
0
votes
0
replies
877
views
Extracting p-value table in Prostar
prostar
proteomics
6.5 years ago
laural710
• 0
1
vote
3
replies
1.6k
views
Running GO analysis via Prostar
prostar
proteomics
rforproteomics
annotationforge
updated 6.6 years ago by
Samuel Wieczorek
▴ 10 • written 6.6 years ago by
lolli.langan
▴ 20
0
votes
3
replies
1.4k
views
Prostar (query on GO analysis)
Prostar
Dapar
clusterprofiler
updated 6.6 years ago by
Samuel Wieczorek
▴ 10 • written 6.6 years ago by
laural710
• 0
0
votes
1
reply
1.2k
views
Prostar and DAPAR installation
install error
package installation
DAPAR
prostar
R version 3.4.4
6.7 years ago
rita.reig
• 0
0
votes
2
replies
1.5k
views
Query regarding Prostar
Prostar
updated 7.1 years ago by
Samuel Wieczorek
▴ 10 • written 8.2 years ago by
kamal.fartiyal84
▴ 10
0
votes
3
replies
1.6k
views
ProStaR Not working, gives error in code?
Prostar
DAPAR
software error
updated 7.1 years ago by
Samuel Wieczorek
▴ 10 • written 7.2 years ago by
van.theodorakis
• 0
8 results • Page
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Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?
by
xiaofeiwang198266
• 0
Thanks for your reply!
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
by
Hervé Pagès
16k
> I have requested gDNAx developers for a feature request to turn off seqlevelsStyle(txdb) Yes, that's the right course of action. `seqlev…
Comment: ISO a solution to rank-order introns by transcript
by
mat149
▴ 80
Hey, In revisiting this question, the following code works for the '+' strand. I am having issues with demarcating intron rank by transcri…
Comment: Normalizing batch effects using technical replicates for DGE analysis between tw
by
Gordon Smyth
52k
Since the intra-block correlation is negative, it would be best to remove `block` from the model. My experience with genetically identical…
Comment: Normalizing batch effects using technical replicates for DGE analysis between tw
by
anna.cot.anna.cot
▴ 30
Thank you! This is actually quite close to my real dataset. I simplified the names to make it easier as an example, but I have now correcte…
Votes
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
A: Expected counts from RSEM in DESeq2
A: Using RSEM reads for DESeq2
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