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prostar
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Problems with Prostar v1.26.4 - issue with convert data prior to filtering
Prostar
2.3 years ago • updated 2.2 years ago
benoit.marchand
• 0
1
vote
5
replies
1.1k
views
Need help for ProStaR Stand-alone install
Prostar
updated 23 months ago by
Wang
• 0 • written 2.4 years ago by
benoit.marchand
• 0
0
votes
0
replies
736
views
Extracting p-value table in Prostar
prostar
proteomics
5.9 years ago
laural710
• 0
1
vote
3
replies
1.4k
views
Running GO analysis via Prostar
prostar
proteomics
rforproteomics
annotationforge
updated 5.9 years ago by
Samuel Wieczorek
▴ 10 • written 5.9 years ago by
lolli.langan
▴ 20
0
votes
3
replies
1.2k
views
Prostar (query on GO analysis)
Prostar
Dapar
clusterprofiler
updated 6.0 years ago by
Samuel Wieczorek
▴ 10 • written 6.0 years ago by
laural710
• 0
0
votes
1
reply
1.0k
views
Prostar and DAPAR installation
install error
package installation
DAPAR
prostar
R version 3.4.4
6.1 years ago
rita.reig
• 0
0
votes
3
replies
1.3k
views
ProStaR Not working, gives error in code?
Prostar
DAPAR
software error
updated 6.5 years ago by
Samuel Wieczorek
▴ 10 • written 6.6 years ago by
van.theodorakis
• 0
0
votes
2
replies
1.4k
views
Query regarding Prostar
Prostar
updated 6.5 years ago by
Samuel Wieczorek
▴ 10 • written 7.6 years ago by
kamal.fartiyal84
▴ 10
8 results • Page
1 of 1
Recent ...
Replies
Comment: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
by
Dylan.Sheerin
• 0
Thank you very much, Gordon. I'll give voomLmFit a go! And for comparisons between the cohorts I presume duplicateCorrelation with standar…
Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
by
Gordon Smyth
50k
Including subjectID in the design matrix always accounts for unbalanced sampling and patient variation but subjects with incomplete records…
Comment: Log-cpm values from limma
by
Gordon Smyth
50k
No, it does not mean that. `voom()` uses the design matrix, including the W covariates, to compute precision weights but not to adjust the …
Comment: Extremely small p-values using Limma for proteomic data
by
Abbey
• 0
This is the code. The only part I changed was adding the contrasts.fit as you suggested. Thanks for taking a look! ``` # Load necessary …
Comment: Extremely small p-values using Limma for proteomic data
by
James W. MacDonald
65k
Probably. I would not expect such large fold changes. But without seeing your code, who knows?
Votes
Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
Answer: Extremely small p-values using Limma for proteomic data
Bioconductor 3.19 is Released!
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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