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proteomics
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8. CGHCall problems (Bernard North [guest]) : Bioconductor Digest, Vol 126, Issue 7
aCGH
RNASeq
ChIPSeq
Proteomics
Annotation
Normalization
GO
Network
Cancer
ChipName
probe
12.4 years ago
Sarah JugurnauthLittle
▴ 20
0
votes
1
reply
1.7k
views
Working with non-type strain annotation
Proteomics
GO
genomes
Proteomics
GO
genomes
updated 12.7 years ago by
Marc Carlson
★ 7.2k • written 12.7 years ago by
Thomas Lin Pedersen
▴ 70
0
votes
1
reply
1.1k
views
Regarding Limma differential expression.
Proteomics
limma
Proteomics
limma
updated 12.9 years ago by
James W. MacDonald
68k • written 12.9 years ago by
nitin mandloi
▴ 10
0
votes
0
replies
1.5k
views
Bioinformatics Position Opening
Proteomics
Infrastructure
Proteomics
Infrastructure
13.1 years ago
Thomas Girke
★ 1.7k
0
votes
0
replies
1.1k
views
Overrepresentation pathway with KEGGPROFILE and SPIA
Proteomics
Pathways
KEGGprofile
Proteomics
Pathways
KEGGprofile
13.1 years ago
slzhao
▴ 10
0
votes
0
replies
1.3k
views
Fwd: rTANDEM package -- An R encapsulation of the X!Tandem algorithm
Proteomics
trigger
rTANDEM
Proteomics
trigger
rTANDEM
13.1 years ago
Frederic Fournier
▴ 40
2
votes
3
replies
1.7k
views
rTANDEM package -- An R encapsulation of the X!Tandem algorithm
Proteomics
rTANDEM
Proteomics
rTANDEM
updated 13.1 years ago by
Steve Lianoglou
★ 13k • written 13.1 years ago by
Frederic Fournier
▴ 40
2
votes
1
reply
2.3k
views
DESeq package
Proteomics
DESeq
Proteomics
DESeq
updated 13.3 years ago by
Bernd Fischer
▴ 550 • written 13.3 years ago by
Maia de Oliveira, Julio
▴ 20
0
votes
0
replies
1.5k
views
PLGEM on metabolomic data?
miRNA
Metabolomics
Proteomics
Normalization
plgem
miRNA
Metabolomics
Proteomics
plgem
13.3 years ago
Norman Pavelka
▴ 140
0
votes
0
replies
1.8k
views
Bioinformatics Academic Coordinator Job Posting
Proteomics
Infrastructure
Proteomics
Infrastructure
13.5 years ago
Guest User
★ 13k
1
vote
12
replies
14k
views
Using limma for quantitative proteomics data
Microarray
Proteomics
limma
Microarray
Proteomics
limma
13.6 years ago
Yong Li
▴ 80
0
votes
0
replies
1.2k
views
2012 Bioconductor European Developers' Workshop - annoucement
Proteomics
Infrastructure
Proteomics
Infrastructure
13.6 years ago
Mark Robinson
▴ 880
0
votes
0
replies
2.6k
views
Open PhD Position - Bioinformatics in collaboration with SAP
Proteomics
Proteomics
13.7 years ago
Amin Moghaddasi
▴ 130
0
votes
5
replies
1.6k
views
Error loading charm
Proteomics
Proteomics
updated 13.7 years ago by
Benilton Carvalho
★ 4.3k • written 13.7 years ago by
Francesco Mancuso
▴ 110
0
votes
0
replies
1.5k
views
Open Position - Academic Coordinator for Bioinformatics
Proteomics
Infrastructure
Proteomics
Infrastructure
13.8 years ago
Thomas Girke
★ 1.7k
0
votes
1
reply
3.4k
views
Import Bam index (Rsamtools)
Proteomics
Rsamtools
Proteomics
Rsamtools
updated 13.8 years ago by
Martin Morgan
25k • written 13.8 years ago by
Francesco Mancuso
▴ 110
0
votes
10
replies
1.9k
views
warning in lumi
Proteomics
lumi
Proteomics
lumi
updated 13.9 years ago by
Martin Morgan
25k • written 13.9 years ago by
Francesco Mancuso
▴ 110
0
votes
1
reply
1.2k
views
Possible bug in SNPchip
Proteomics
SNPchip
Proteomics
SNPchip
updated 14.2 years ago by
Rob Scharpf
▴ 250 • written 14.2 years ago by
Francesco Mancuso
▴ 110
0
votes
2
replies
1.6k
views
VanillaICE
Proteomics
VanillaICE
Proteomics
VanillaICE
updated 14.2 years ago by
Valerie Obenchain
★ 6.8k • written 14.2 years ago by
Francesco Mancuso
▴ 110
0
votes
0
replies
1.5k
views
Bioconductor 2.9 is released
Transcription
Sequencing
miRNA
qPCR
Proteomics
Annotation
Normalization
Visualization
cdf
14.2 years ago
Dan Tenenbaum
★ 8.2k
0
votes
0
replies
1.3k
views
Computational biologist positions at the PICR
Proteomics
Cancer
Proteomics
Cancer
14.3 years ago
Crispin Miller
★ 1.1k
0
votes
0
replies
1.1k
views
European Developers's Workshop 2011
Proteomics
Cancer
Proteomics
Cancer
14.4 years ago
Crispin Miller
★ 1.1k
0
votes
0
replies
1.2k
views
Bioconductor European Developers' Workshop, Manchester 2011
Proteomics
Cancer
Proteomics
Cancer
14.4 years ago
Crispin Miller
★ 1.1k
0
votes
0
replies
3.4k
views
PhD student in Bioinformatics, Computational Biology at Technical University of Munich, Germany
Proteomics
Pathways
Proteomics
Pathways
14.5 years ago
Amin Moghaddasi
▴ 130
0
votes
8
replies
2.9k
views
IPI to entrez id
Proteomics
GO
biomaRt
Proteomics
GO
biomaRt
14.9 years ago
Dick Beyer
★ 1.4k
0
votes
1
reply
1.2k
views
Problems with IlluminaHumanMethylation27k.db
Proteomics
Proteomics
14.9 years ago
Francesco Mancuso
▴ 110
0
votes
1
reply
1.1k
views
Chromosome information in MethyLumiM object
Proteomics
Proteomics
updated 15.0 years ago by
Tim Triche
★ 4.2k • written 15.0 years ago by
Francesco Mancuso
▴ 110
0
votes
2
replies
1.1k
views
package for protein MS analysis (SELDI-TOF)
Proteomics
GO
PROcess
Proteomics
GO
PROcess
updated 15.0 years ago by
Laurent Gatto
1.6k • written 15.0 years ago by
Guido Hooiveld
★ 4.1k
0
votes
5
replies
2.6k
views
Package plgem for analysis of spectral counts, was 'limma for spectral counts'
Microarray
Proteomics
limma
plgem
Microarray
Proteomics
limma
plgem
updated 15.3 years ago by
Yolande Tra
▴ 120 • written 15.3 years ago by
Pavelka, Norman
▴ 70
0
votes
0
replies
883
views
Bioconductor Developer Meeting Europe - 17.-18. 11. 2010
Proteomics
Proteomics
15.3 years ago
Wolfgang Huber
★ 13k
0
votes
0
replies
1.1k
views
Bioinformatic Core Facility wiki at SIB
Proteomics
Proteomics
15.6 years ago
Francesco Mancuso
▴ 40
0
votes
0
replies
1.5k
views
CFP: 23rd IEEE International Symposium on Computer-Based Medical Systems 2010 (IEEE CBMS 2010)
Proteomics
CAMERA
Proteomics
CAMERA
15.7 years ago
Amandeep Sidhu
▴ 20
0
votes
0
replies
1.5k
views
CFP: 23rd IEEE International Symposium on Computer-Based Medical Systems 2010
Proteomics
CAMERA
Proteomics
CAMERA
15.8 years ago
Amandeep Sidhu
▴ 20
1
vote
1
reply
5.5k
views
edgeR: pseudocounts, logConc and logFC
Proteomics
graph
edgeR
Proteomics
graph
edgeR
updated 15.8 years ago by
Mark Robinson
★ 1.1k • written 15.8 years ago by
Ann Hess
▴ 340
0
votes
3
replies
1.6k
views
PCA or concordance
Proteomics
Proteomics
updated 15.9 years ago by
Sean Davis
21k • written 15.9 years ago by
Johnny H
▴ 80
0
votes
4
replies
1.7k
views
Bioconductor Digest, Vol 84, Issue 19
Proteomics
Proteomics
updated 15.9 years ago by
Martin Morgan
25k • written 15.9 years ago by
Dick Beyer
★ 1.4k
0
votes
0
replies
1.3k
views
Statistical Position Supporting Systems Biology
Genetics
Proteomics
Genetics
Proteomics
16.0 years ago
Max Kuhn
▴ 60
0
votes
0
replies
2.3k
views
Post Doc position, Berlin Germany
Sequencing
Microarray
Proteomics
Pathways
Network
Cancer
Sequencing
Microarray
Proteomics
16.7 years ago
Paul Hammer
▴ 220
0
votes
0
replies
1.2k
views
Research positions available in neuroproteomics
Proteomics
Infrastructure
Proteomics
Infrastructure
16.9 years ago
Abhilash Venu
▴ 340
0
votes
0
replies
1.7k
views
sd==0 for some probesets when using gcrma
Microarray
Proteomics
Epigenetics
Normalization
GO
Cancer
hgu95av2
affy
graph
gcrma
GO
17.1 years ago
Dick Beyer
★ 1.4k
0
votes
8
replies
2.3k
views
Bimodal Distrinbution
Proteomics
Proteomics
updated 17.1 years ago by
Mayer, Claus-Dieter
▴ 120 • written 17.1 years ago by
Francesco Mancuso
▴ 20
0
votes
1
reply
1.2k
views
ANNOUNCEMENT: 20% Discount on Books from Chapman & Hall/CRC!
Proteomics
Cancer
Proteomics
Cancer
17.5 years ago • updated 17.4 years ago
Thomas, Judy
▴ 40
0
votes
3
replies
3.0k
views
How to carry out Gene Set Enrichment Analysis(GSEA) on an ordered list of Entrezgene ids?
Proteomics
hgu95av2
GSEABase
Proteomics
hgu95av2
GSEABase
17.5 years ago
anna freni sterrantino
▴ 120
0
votes
0
replies
1.6k
views
How to carry out Gene Set Enrichment Analysis(GSEA) on an ordered list of Entrezgene ids?
Proteomics
hgu95av2
GSEABase
Proteomics
hgu95av2
GSEABase
17.5 years ago
Chanchal Kumar
▴ 130
0
votes
0
replies
1.3k
views
DAnTE: Statistical Tool using R and R(D)COM
Proteomics
Normalization
GUI
Proteomics
Normalization
GUI
17.5 years ago
Ashoka Polpitiya
▴ 10
0
votes
0
replies
1.2k
views
Subtracting batch effect with Limma
Proteomics
limma
Proteomics
limma
17.6 years ago
Paul ChristophSchröder
▴ 70
0
votes
0
replies
1.9k
views
open Junior group leader position, Medical University of Innsbruck, Austria
Proteomics
Cancer
microRNA
tRanslatome
Proteomics
Cancer
microRNA
tRanslatome
17.7 years ago
Johannes Rainer
▴ 300
0
votes
0
replies
1.6k
views
Bioinformatics Faculty Position available at UCSF Cancer Center
Proteomics
Cancer
Proteomics
Cancer
17.7 years ago
Ru-Fang Yeh
▴ 20
0
votes
0
replies
1.6k
views
Bioinformatics Positions, M. D. Anderson Cancer Center
Proteomics
Cancer
Proteomics
Cancer
17.8 years ago
caiwei@mdanderson.org
▴ 110
0
votes
3
replies
2.3k
views
GeneSetCollection from GSEA
Proteomics
GSEABase
Proteomics
GSEABase
updated 17.9 years ago by
Martin Morgan
25k • written 17.9 years ago by
Paul ChristophSchröder
▴ 70
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TikTs33ssalpc
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This rotation style program sounds like a great way to explore different fields before committing to one. Similarly, apkgamex lets users ex…
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Wilcox/Mann-Whitney-U cannot work because it is bound to sample size even when all of group X are lower than all of group Y. At 4 vs 3 the …
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Jeremy
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by
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53k
The design matrix that I described above is completely general. I imagine that it would be possible to use the same approach to generate fu…
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