Showing : repeated measures • reset
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Time series experiment analysis in DEseq2 without T=0 and three independent experiments with linked samples
deseq2 rnaseq repeated measures time series design formula
updated 5.3 years ago by 43k • written 5.3 years ago by ▴ 10
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DESeq2 for repeated/clustered samples
deseq2 repeated measures
updated 5.4 years ago by 43k • written 5.4 years ago by • 0
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dream vignette says limma-voom repeated measures two-group comparison needs two duplicateCorrelation rounds which differs from limma user's guide and…
dream variancePartition limma differential expression repeated measures
updated 5.6 years ago by 52k • written 5.6 years ago by ▴ 20
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SVA for repeated measures design
SVA deseq2 repeated measures
updated 5.6 years ago by ★ 3.4k • written 5.6 years ago by • 0
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Incorporating subject ID as random effect for repeated measures RNA-Seq analysis
limma rna-seq mixed model repeated measures
updated 6.6 years ago by 52k • written 6.6 years ago by ▴ 280
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Repeated Measures, Within-Subject, Between-Groups RNAseq Analysis
edgeR rnaseq repeated measures
updated 7.1 years ago by ★ 7.9k • written 7.1 years ago by • 0
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DESeq2 - How to study time course experiment taking subject variability into account?
deseq2 repeated measures time course
updated 7.3 years ago by 43k • written 7.3 years ago by • 0
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LIMMA: interpreting interaction terms in an unbalanced factorial design with repeated measures
LIMMA FACTORIAL REPEATED MEASURES differential gene expression
9.7 years ago • updated 9.5 years ago robert.maughan • 0
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Model in metagenomeSeq
repeated measures
9.5 years ago PJ • 0
9 results • Page 1 of 1
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Comment: Unable to install a forged BSgenome package by James W. MacDonald 68k
R doesn't like the name of your package. I would bet that it's the minus sign, so maybe remove that from the name of the package and from t…
Comment: Unable to install a forged BSgenome package by JABEZ RAJU • 0
install.packages("E:/PhD data/RNAseq/TSS/BSgenome.Hnudivirus-2.NCBI.ViralProj14215", repos = NULL, type = "source") Installing package into…
Comment: DESeq2 with proteomics data by wook2014 • 0
You may need to do NA imputation before give the data to DEseq2 and there are study on DEseq2 performance on proteomics data, like :https:/…
Answer: Unable to install a forged BSgenome package by James W. MacDonald 68k
Add a repos = NULL to `install.packages`. You may also need to either move the file to a dir that doesn't have a space in the name or you […
Comment: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an by James W. MacDonald 68k
Have you figured out how to do this using tidy grammar? Using non-tidy grammar is quite simple, and perhaps you already know how to do that…
Votes
Answer: Unable to install a forged BSgenome package
Answer: How to combine two DESeq2 objects (dds) for analysis
How to combine two DESeq2 objects (dds) for analysis
How can I correctly use phyloseq with Docker?
A: DESeq2::sizeFactors() function does not output the sizeFactor table.
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