Showing : repostools • reset
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Bioconductor web page
GO Cancer tkWidgets reposTools widgetTools simpleaffy affyQCReport affyio GO Cancer
18.7 years ago Seth Falcon ★ 7.4k
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votes
3
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1.3k
views
Problems by installing getBioC()
reposTools reposTools
updated 18.8 years ago by ★ 7.4k • written 18.8 years ago by ▴ 10
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2
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3.4k
views
Error in function (classes, fdef, mtable)
cdf genefilter reposTools gcrma matchprobes affyPLM simpleaffy affyio cdf genefilter
updated 19.2 years ago by ★ 7.4k • written 19.2 years ago by ▴ 360
0
votes
4
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1.7k
views
problems with Affy vignette and affybatch objects
GO Survival cdf Biobase annotate genefilter multtest reposTools affy affydata graph GO
updated 19.3 years ago by 25k • written 19.3 years ago by ★ 2.2k
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1
reply
949
views
syncLocalLibList in BioC 1.8 reposTools
reposTools reposTools
updated 19.3 years ago by ★ 7.4k • written 19.3 years ago by ▴ 890
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2
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1.2k
views
cdfenv files ATTN: James McDonald
SNP cdf probe reposTools affy SNP cdf probe reposTools affy
updated 19.4 years ago by 68k • written 19.4 years ago by ▴ 20
0
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1
reply
949
views
reposTools 1.10.0 pointing to BioC1.7 not 1.8
reposTools reposTools
updated 19.7 years ago by ★ 7.4k • written 19.7 years ago by ▴ 50
0
votes
0
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1.2k
views
Why mm's changing after bg.adjust.gcrma?
drosgenome1 cdf Biobase reposTools affy gcrma affyPLM simpleaffy affyQCReport affyio cdf
19.7 years ago Jenny Drnevich ★ 2.2k
0
votes
2
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1.2k
views
problem with CoCiteStats in bioC 1.8
cdf reposTools affy CoCiteStats affyio cdf reposTools affy CoCiteStats affyio
updated 19.8 years ago by ★ 7.4k • written 19.8 years ago by ▴ 890
0
votes
3
replies
1.9k
views
error in mas5calls() for soybean chip
Survival hu6800 cdf probe Biobase genefilter reposTools affy affydata limma gcrma made4
updated 19.8 years ago by ▴ 70 • written 19.8 years ago by ★ 2.2k
0
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0
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1.6k
views
Problems using text to subset array information from anexpression set
Cancer cdf reposTools affy PROcess Cancer cdf reposTools affy PROcess
19.8 years ago Alvord, Greg DMS [Contr] ▴ 160
0
votes
4
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1.9k
views
Problems using text to subset array information from an expression set
cdf reposTools affy PROcess cdf reposTools affy PROcess
updated 19.8 years ago by ★ 4.3k • written 19.8 years ago by ▴ 110
0
votes
1
reply
1.4k
views
install package from local path with reposTools
reposTools reposTools
updated 19.9 years ago by ▴ 780 • written 19.9 years ago by ▴ 30
0
votes
3
replies
1.8k
views
widgetTools wFuns problem
DynDoc tkWidgets reposTools widgetTools DynDoc tkWidgets reposTools widgetTools
updated 20.0 years ago by ★ 2.9k • written 20.0 years ago by ▴ 80
0
votes
1
reply
1.2k
views
ReadAffy question
GO Ruuid DynDoc annotate genefilter multtest tkWidgets reposTools affy widgetTools limma
updated 20.0 years ago by 68k • written 20.0 years ago by ▴ 890
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1
reply
1.1k
views
Resourcerer warnings
GO Organism reposTools AnnBuilder Resourcerer GO Organism reposTools AnnBuilder
20.2 years ago Francois Pepin ★ 1.3k
0
votes
2
replies
1.5k
views
problem with annaffy aafFunction function
GO hgu95av2 rat2302 Biobase annotate reposTools affy annaffy GO hgu95av2 rat2302 affy
updated 20.2 years ago by 68k • written 20.2 years ago by ▴ 890
0
votes
1
reply
985
views
error in getMonograph() - many packages not available
Biobase reposTools affy Biobase reposTools affy
updated 20.3 years ago by ★ 7.4k • written 20.3 years ago by ★ 2.2k
0
votes
1
reply
1.1k
views
PLIER affinities
rae230a cdf probe reposTools affy plier rae230a cdf probe reposTools affy plier
updated 20.3 years ago by 68k • written 20.3 years ago by ▴ 80
0
votes
0
replies
862
views
memory problems on IRIX machine
cdf reposTools affy cdf reposTools affy
20.3 years ago Jenny Drnevich ★ 2.2k
0
votes
0
replies
1.2k
views
problem with get.genes.by.pathway
Biobase reposTools KEGGSOAP Biobase reposTools KEGGSOAP
20.3 years ago Kimpel, Mark W ▴ 890
0
votes
3
replies
1.3k
views
problem with package version of rat2302 1.8.5
Annotation rat2302 Biobase reposTools affy Annotation rat2302 Biobase reposTools affy
updated 20.3 years ago by ★ 7.4k • written 20.4 years ago by ▴ 890
0
votes
1
reply
913
views
[R] Bioconductor and R-devel
Microarray Cancer probe reposTools affy Microarray Cancer probe reposTools affy
20.4 years ago Seth Falcon ★ 7.4k
0
votes
1
reply
1.3k
views
File permission failures when building Bioconductor on AMD64/Opteron
reposTools affy reposTools affy
20.4 years ago Michael Redmond ▴ 20
0
votes
0
replies
899
views
moe430a and moe430av2 comparison
moe430a cdf probe reposTools affy moe430a cdf probe reposTools affy
20.5 years ago Margaret Gardiner-Garden ▴ 160
0
votes
2
replies
1.5k
views
zebrafish simpleaffy Error in FUN(X[[4]], ...) : subscript out of bounds
zebrafish cdf probe reposTools gcrma matchprobes simpleaffy zebrafish cdf probe gcrma
updated 20.5 years ago by ▴ 780 • written 20.5 years ago by ★ 1.4k
0
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1
reply
1.6k
views
zebrafish simpleaffy Error in FUN(X[[4]], ...) : subscript out of bounds
zebrafish cdf probe reposTools gcrma matchprobes simpleaffy zebrafish cdf probe gcrma
updated 20.5 years ago by ★ 1.4k • written 20.5 years ago by ★ 1.1k
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votes
1
reply
1.4k
views
Error in qc.affy(unnormalised, ...) : I'm sorry, I do not know about chip type: moe430acdf
GO moe430a cdf reposTools limma gcrma matchprobes siggenes simpleaffy GO moe430a cdf
updated 20.6 years ago by ★ 1.4k • written 20.6 years ago by ★ 1.1k
0
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0
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1.1k
views
Error in qc.affy(unnormalised, ...) : I'm sorry, I do not know about chip type: moe430acdf
GO moe430a cdf reposTools limma gcrma matchprobes siggenes simpleaffy GO moe430a cdf
20.6 years ago Dick Beyer ★ 1.4k
0
votes
0
replies
1.1k
views
annotation problem with hgu133plus2
GO cdf annotate reposTools affy siggenes annaffy GO cdf annotate reposTools affy
20.7 years ago Seth Falcon ★ 7.4k
0
votes
1
reply
946
views
Limma Load failed
reposTools reposTools
updated 20.7 years ago by ★ 7.4k • written 20.7 years ago by ▴ 10
0
votes
2
replies
1.1k
views
ReadAffy for moe430acdf
cdf reposTools affy cdf reposTools affy
updated 20.8 years ago by ★ 7.4k • written 20.8 years ago by ▴ 160
0
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0
replies
1.1k
views
question about multtest v.1.5.2
Survival genefilter multtest reposTools Survival genefilter multtest reposTools
20.8 years ago ivan.borozan@utoronto.ca ▴ 80
0
votes
3
replies
6.0k
views
ellipse package
reposTools reposTools
updated 20.8 years ago by ★ 13k • written 20.8 years ago by ▴ 20
0
votes
7
replies
1.9k
views
getBioC and install.packages2 fail
Proteomics reposTools Proteomics reposTools
updated 20.8 years ago by ★ 7.4k • written 20.8 years ago by ▴ 210
0
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0
replies
1.0k
views
Follow-up to: [R] Annotation metadata "kills" help.search
Annotation GO hgu133plus2 reposTools Annotation GO hgu133plus2 reposTools
20.8 years ago Gerard Tromp ▴ 10
0
votes
3
replies
1.2k
views
multtest dependencies
Survival genefilter multtest reposTools Survival genefilter multtest reposTools
20.9 years ago Francois Pepin ★ 1.3k
0
votes
0
replies
1.3k
views
reposTool package: permission problems on liblisting.Rda file
reposTools reposTools
20.9 years ago Conrad Halling ▴ 10
0
votes
0
replies
961
views
installing packages in bioconductor
reposTools reposTools
20.9 years ago Seth Falcon ★ 7.4k
0
votes
2
replies
1.2k
views
error in installing Bioconductor development packages
Biobase annotate genefilter reposTools affy Biobase annotate genefilter reposTools affy
updated 21.0 years ago by ★ 7.4k • written 21.0 years ago by ▴ 10
0
votes
2
replies
1.4k
views
getBioC install problem in Fedora
reposTools reposTools
updated 21.0 years ago by ★ 5.5k • written 21.0 years ago by ▴ 320
0
votes
2
replies
1.3k
views
Need better quality control for reliable installation of bioconductor packages?
Cancer reposTools RdbiPgSQL PROcess twilight iSPlot Cancer reposTools RdbiPgSQL PROcess
updated 21.1 years ago by ★ 5.5k • written 21.1 years ago by 53k
0
votes
2
replies
1.3k
views
Problems installing Bioconductor on linux(MEPIS)
reposTools reposTools
updated 21.2 years ago by ★ 5.5k • written 21.2 years ago by ▴ 420
0
votes
0
replies
1.5k
views
Installing Rv2.0.0 on MacOS 10.3.x
moe430a cdf probe annotate genefilter reposTools affy annaffy moe430a cdf probe affy
21.3 years ago rkakkar@uchicago.edu ▴ 100
0
votes
1
reply
936
views
where is GO 1.6.0 version required by annaffy , anyone know?
GO reposTools GO reposTools
updated 21.3 years ago by ▴ 360 • written 21.3 years ago by ★ 5.5k
0
votes
3
replies
1.3k
views
Problem with BioC
reposTools reposTools
updated 21.4 years ago by ★ 3.9k • written 21.4 years ago by ▴ 100
0
votes
1
reply
928
views
bug in reposTools 1.4.11: missing getRversion
reposTools reposTools
updated 21.4 years ago by ★ 3.9k • written 21.4 years ago by ▴ 30
0
votes
1
reply
918
views
error with update.package2
reposTools reposTools
21.4 years ago Adaikalavan Ramasamy ★ 1.8k
0
votes
0
replies
823
views
Problem with genRepos function in reposTools package
reposTools reposTools
21.5 years ago Valtteri Wirta ▴ 30
0
votes
0
replies
898
views
repos tools
reposTools reposTools
21.5 years ago peter robinson ▴ 300
106 results • Page 1 of 3
Recent ...
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Comment: Confirm that OpenStats will not be archived (pryr dependency) by Marina • 0
Thank you!
Comment: AnnotationForge makeOrgPackage rsqlite_send_query error by ansley.r.burtch • 0
Hi! I am sure you are well into your career now and haven't worked on this for a while, but I wanted to let you know this is still helping …
Comment: limpa analysis advice by Gordon Smyth 53k
I prefer for limpa to work on precursor intensities, because my understanding is that precursors are the basic unit of identification and q…
Answer: Confirm that OpenStats will not be archived (pryr dependency) by shepherl 4.3k
As long as OpenStats is building cleanly and all needed stated dependencies are on CRAN or Bioconductor, OpenStats will not be archived. I…
Comment: Lowly expressed genes reported as significant when using lfcThreshold in DESeq by Michael Love 43k
Yes, I find that the LFC shrinkage and its corresponding stat `svalue` if you use lfcShrink with a threshold often returns more reliable ge…
Votes
Comment: limpa analysis advice
C: AnnotationForge makeOrgPackage rsqlite_send_query error
Answer: Limpa Pipeline Order
Answer: Array weights in dpcDE
Answer: Array weights in dpcDE
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