Bioconductor Rrbs

Showing : rrbs • reset

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1.5k

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edgeR model-selection RRBS mixture-experiment

4.5 years ago ingerslev • 0

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1.2k

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MethylCC RRBS cord blood

5.2 years ago weichen-cls • 0

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1.1k

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Biseq Methylation DMP DMR RRBS

5.2 years ago i.s.castanho • 0

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938

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biseq betaRegression RRBS Methylation

5.5 years ago i.s.castanho • 0

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2.9k

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edgeR rrbs

updated 6.8 years ago by Gordon Smyth 53k • written 6.8 years ago by ingerslev • 0

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3.2k

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methykit rrbs

updated 7.4 years ago by Mike Smith ★ 6.6k • written 7.4 years ago by bekah ▴ 40

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2.0k

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edgeR methyation RRBS

updated 7.7 years ago by Gordon Smyth 53k • written 7.7 years ago by osa.zuta ▴ 40

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1.4k

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biseq RRBS betaregression

8.5 years ago l.eijssen • 0

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2.5k

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sva RRBS

updated 8.6 years ago by Jeff Leek ▴ 650 • written 8.6 years ago by mrodrigues.fernanda ▴ 10

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2.1k

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rrbs batch effect methylation sva

updated 9.0 years ago by dashbrook1 • 0 • written 10.2 years ago by GFM ▴ 20

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1.9k

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limma rrbs bsseq

updated 9.3 years ago by Aaron Lun ★ 29k • written 9.3 years ago by nhejazi • 0

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2.6k

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biseq RRBS SAAP-BS coverage

10.4 years ago maria.maqueda • 0

12 results • Page 1 of 1

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Answer: Gatins Set error by James W. MacDonald 68k

`GatingSet` isn't a function in `flowCore`. It is however in `flowWorkspace`, which you would need to load first.

Answer: How to model DE for RNA-seq in concordant monozygotic twins? by Gordon Smyth 53k

Your question is more about science than it is about software syntax, and I can't give advice about how to conduct a scientific analysis, n…

Comment: incomplete imputation of missing values with LEA impute() function by Gordon Smyth 53k

Nadia, please tag your question with the name of the package ("LEA") that you are asking about. "impute" is the name of a different Biocond…

Comment: Sharing a collection of datasets in ExperimentHub by Aaron Lun ★ 29k

FYI the **scRNAseq** packages uses a non-ExperimentHub storage platform, see [here](https://github.com/ArtifactDB/gypsum-worker) for more d…

Comment: Error Loading Experiment from SimBenchData Package by ATpoint ★ 4.9k

Is the Seurat package installed? The error somewhat suggests that it could be related, and at https://www.bioconductor.org/packages/release…

Votes

Comment: incomplete imputation of missing values with LEA impute() function

Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce

Answer: ordinary t from limma [was: How would I normally compare swirl?]

Comment: readDNAStringSet with non DNA characters

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design

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