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sample
•
reset
2
votes
3
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1.6k
views
locateVariants with sample names
annotation
variantannotation
sample
8.9 years ago
by0
• 0
0
votes
3
replies
1.0k
views
Sampling protein coding genes of the same length distribution as another set of elements using GRanges
granges
R
sample
updated 8.5 years ago by
Julian Gehring
★ 1.3k • written 8.5 years ago by
Dimitris Polychronopoulos
▴ 80
0
votes
3
replies
1.1k
views
I want to sample (random ) nucleic acids at middle 20 positions of DNAstring set
DNAStringSet
sample
updated 8.4 years ago by
Hervé Pagès
16k • written 8.5 years ago by
vinod.acear
▴ 50
0
votes
1
reply
1.6k
views
Sampling from a flowSet to a flowFrame
bioconductor
flowcore
sample
updated 7.8 years ago by
Jiang, Mike
★ 1.3k • written 7.8 years ago by
cherryzt
• 0
0
votes
4
replies
1.1k
views
Data structure for my dataset
metadata
grangeslist
granges
sample
updated 7.0 years ago by
Michael Lawrence
★ 11k • written 7.0 years ago by
Sim1pall8a
• 0
0
votes
0
replies
857
views
select samples for qPCR
qpcr
sample
8.6 years ago
Frederico Moraes Ferreira
▴ 100
6 results • Page
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Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks
by
ATpoint
★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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