Showing : qpcr • reset
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nondetects and technical replicates
qPCR nondetects
2.3 years ago Ed Siefker ▴ 230
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1.1k
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How to perform a cluster analysis in RT-qPCR or HT-qPCR results?
cluster qpcr qpcrNorm clusterProfiler HTqPCR
3.3 years ago Javier • 0
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2
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2.4k
views
log2FoldChange calculation in DESeq2
DESeq2 RNASeq qPCR qPCRData
4.5 years ago Claire • 0
3
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0
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871
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Creating qPCRset for nondetects anlaysis from QuantStudio data
nondetects qPCR qPCRData
4.8 years ago jhackett ▴ 30
3
votes
4
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5.1k
views
Using limma for the analysis of qPCR data
NormqPCR EasyqpcR qPCR HTqPCR limma
updated 4.3 years ago by ▴ 380 • written 5.1 years ago by ▴ 680
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1
reply
1.1k
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Most liked/utilized qPCR analysis package
qPCR
updated 7.8 years ago by 53k • written 7.8 years ago by ▴ 60
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0
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1.2k
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NormqPCR Package query
SelectHK qpcr Genorm
7.9 years ago jingchakvk • 0
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0
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1.2k
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HTqPCR trouble with changeCtLayout
htqpcr qPCR
8.0 years ago samantha_jeschonek • 0
1
vote
7
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2.4k
views
EDGE: Persistent lrt() and odp() command pi0est() error due to low p values
edge qpcr qvalue
9.0 years ago • updated 8.1 years ago joe.d.moore.ii • 0
1
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4
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2.4k
views
ddCT Package for StepOnePlus qPCR output
qPCR ddCt geneexpression
updated 8.6 years ago by ▴ 120 • written 8.6 years ago by ▴ 60
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0
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1.2k
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Batch Correction in HTqPCR?
qPCR htqpcr
9.1 years ago bradley • 0
1
vote
0
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2.4k
views
DE analysis of PCR array [was: dataset dim for siggenes]
qPCR Normalization multtest limma siggenes
11.5 years ago • updated 9.1 years ago Gordon Smyth 53k
0
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1.5k
views
Replicating read.qPCR - "attribute on NULL"
qpcr R
9.5 years ago t.f.jones • 0
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0
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1.2k
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select samples for qPCR
qpcr sample
10.5 years ago Frederico Moraes Ferreira ▴ 100
1
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3
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3.2k
views
ddCt calculation using bioconductor package
ddct qPCR
updated 4.7 years ago by ▴ 60 • written 11.0 years ago by ▴ 30
1
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2
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2.2k
views
qRT-PCR Sample Maximization software analysis and proper experimental design advice
qPCR Sample Maximization Analysis Experimental Design qRT-PCR
updated 10.8 years ago by 53k • written 10.8 years ago by ▴ 450
1
vote
1
reply
2.2k
views
Are the logFC confidence intervals returned by topTable adjusted for multiple comparisons?
Microarray qPCR limma
updated 11.4 years ago by 53k • written 11.5 years ago by ▴ 30
0
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5
replies
2.0k
views
dataset dim for siggenes
qPCR limma siggenes
updated 11.5 years ago by 68k • written 11.5 years ago by ▴ 100
0
votes
1
reply
1.7k
views
deseq2 for pair-wise analysis
qPCR qPCR
updated 11.6 years ago by 43k • written 11.6 years ago by ★ 13k
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0
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1.5k
views
EasyqPCR package - extracting Standard error values
qPCR EasyqpcR qPCR EasyqpcR
11.7 years ago Tommaso Raffaello ▴ 60
1
vote
0
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1.4k
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HTqPCR package data layout - how flexible is it?
qPCR qPCR
11.7 years ago Guest User ★ 13k
0
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0
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4.7k
views
Bioconductor 2.14 is released
BiocViews aCGH SNP Sequencing RNASeq ChIPSeq miRNA Microarray qPCR Metabolomics Coverage
11.9 years ago Dan Tenenbaum ★ 8.2k
0
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2
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2.7k
views
First time use of limma for two-color agilent array analysis
qPCR limma GeneSpring qPCR limma GeneSpring
updated 12.0 years ago by 68k • written 12.0 years ago by ▴ 30
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2
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1.9k
views
creating a qPCRset from Fluidigm 96*96 arrays in HTqPCR
qPCR qPCR
updated 12.0 years ago by ▴ 150 • written 12.0 years ago by ▴ 50
0
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5
replies
2.4k
views
SCAN.UPC for Illumina arrays?
RNASeq qPCR affy oligo frma RNASeq qPCR affy oligo frma
updated 12.3 years ago by ▴ 600 • written 12.3 years ago by ★ 4.2k
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0
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1.9k
views
ddCt calculation and statistics
qPCR ddCt qPCR ddCt
12.5 years ago Guest User ★ 13k
0
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0
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1.5k
views
test qPCR data for differential expression
qPCR qPCR
12.6 years ago Andreia Fonseca ▴ 810
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17
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4.0k
views
[Bioc] RNAseq less sensitive than microarrays? Is it a statistical issue?
Sequencing RNASeq Microarray qPCR Coverage edgeR DESeq Sequencing RNASeq Microarray qPCR
updated 12.8 years ago by ★ 13k • written 12.8 years ago by ▴ 330
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1
reply
4.8k
views
EdgeR vs voom, what to consider when deciding which to use
RNASeq qPCR edgeR RNASeq qPCR edgeR
updated 12.9 years ago by ★ 13k • written 12.9 years ago by ▴ 330
0
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0
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1.5k
views
workflow from NormqPCR 5.1 to 5.3
qPCR NormqPCR qPCR NormqPCR
13.0 years ago James Perkins ▴ 120
0
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0
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1.5k
views
workflow from NormqPCR 5.1 to 5.3
qPCR NormqPCR qPCR NormqPCR
13.0 years ago Guest User ★ 13k
0
votes
2
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2.3k
views
reading in data in ReadqPCR
qPCR Annotation HTqPCR qPCR Annotation HTqPCR
13.0 years ago Guest User ★ 13k
0
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1
reply
1.6k
views
replicating ReadqPCR
qPCR qPCR
updated 13.0 years ago by ▴ 300 • written 13.0 years ago by ★ 13k
0
votes
1
reply
2.6k
views
Bioconductor Digest, Vol 120, Issue 12
Microarray qPCR Coverage Annotation Pathways Visualization Cancer Breast Organism affy
13.0 years ago Matthew Thornton ▴ 390
0
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2
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2.5k
views
HTqPCR problem with creation of qPCRset
qPCR HTqPCR qPCR HTqPCR
updated 13.0 years ago by 68k • written 13.0 years ago by ▴ 20
0
votes
0
replies
1.3k
views
Error Bars on EdgeR
qPCR qPCR
13.0 years ago Ian Sudbery ▴ 30
0
votes
0
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1.7k
views
structure of cfx file for HTqPCR
Microarray qPCR cycle HTqPCR Microarray qPCR cycle HTqPCR
13.1 years ago Guest User ★ 13k
0
votes
0
replies
2.0k
views
Biorad iCycler cfx manager files and HTqPCR
Microarray qPCR HTqPCR a4 Microarray qPCR HTqPCR a4
13.1 years ago b1gorsuch@comcast.net ▴ 20
1
vote
1
reply
1.6k
views
qRT-PCR - reading tab-delimited file (biol & tech replicates)
qPCR ReadqPCR qPCR ReadqPCR
13.1 years ago boczniak767 ▴ 740
0
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0
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1.2k
views
Using different file formats with oligo and analysis packages using oligo
SNP Microarray qPCR cycle SNP Microarray qPCR cycle
13.1 years ago Hans Thompson ▴ 30
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0
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1.4k
views
RankProd absurd results
qPCR RankProd qPCR RankProd
13.2 years ago Guest User ★ 13k
0
votes
0
replies
3.7k
views
Bioconductor 2.11 is released
BiocViews SNP Transcription Sequencing miRNA Microbiome Microarray qPCR Genetics Coverage
13.4 years ago Dan Tenenbaum ★ 8.2k
0
votes
0
replies
1.0k
views
Analyzing expression Affymetrix Hugene1.0.st array
qPCR qPCR
13.4 years ago Dario Strbenac ★ 1.6k
0
votes
0
replies
1.2k
views
sizepower
qPCR GUI qPCR GUI
13.4 years ago Michael Salbaum ▴ 80
0
votes
0
replies
1.9k
views
HTqPCR
qPCR limma ddCt HTqPCR qPCR limma ddCt HTqPCR
13.5 years ago Heidi Dvinge ★ 2.0k
0
votes
0
replies
1.4k
views
HTqPCR problems
Microarray qPCR GO Preprocessing GLAD HTqPCR Microarray qPCR GO Preprocessing GLAD
13.5 years ago cfischer ▴ 10
0
votes
2
replies
2.7k
views
Fwd: help
qPCR qPCR
updated 13.5 years ago by ★ 2.0k • written 13.5 years ago by ▴ 30
0
votes
0
replies
1.3k
views
HtqPCR-help
qPCR qPCR
13.5 years ago rakesh sharma ▴ 30
0
votes
0
replies
1.1k
views
help
qPCR qPCR
13.5 years ago Guest User ★ 13k
0
votes
0
replies
1.1k
views
help - HTqPCR and lightcycler
qPCR HTqPCR qPCR HTqPCR
13.6 years ago Heidi Dvinge ★ 2.0k
119 results • Page 1 of 3
Recent ...
Replies
Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20
Thanks both for this useful information.
Comment: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k
SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by a2a2hd42aa • 0
Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …
Answer: Issue loading and downloading Bioconductor 3.22 packages after update by strawberry3 • 0
Hi, thank you all for the advice. Using James's advice, I managed to install SNPlocs.Hsapiens.dbSNP155.GRCh38, but it took almost half an …
Answer: Issue loading and downloading Bioconductor 3.22 packages after update by James W. MacDonald 68k
As Robert and ATpoint have mentioned, you need to allow more time to download a large file like this. ``` > options(timeout = 5e5) > l…
Votes
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
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