Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
santa
•
reset
1
vote
0
replies
1.8k
views
limma technical replicates and biological replicates in same design
limma
SANTA
16.0 years ago • updated 6.2 years ago
Gordon Smyth
52k
0
votes
1
reply
1.4k
views
limma technical replicates and biological replicates in the same design
limma
SANTA
limma
SANTA
updated 6.2 years ago by
Gordon Smyth
52k • written 16.0 years ago by
Marcelo Laia
▴ 450
0
votes
0
replies
1.4k
views
FOSBE 2012
SANTA
SANTA
13.3 years ago
mabawsa
▴ 20
0
votes
5
replies
1.5k
views
Selected probes from a given probeset
Microarray
SANTA
Microarray
SANTA
13.4 years ago
Ramiro Rodríguez
▴ 30
0
votes
0
replies
1.5k
views
Bioinformatics course - October 2011 Registration is now open
Microarray
Cancer
biomaRt
ArrayExpress
genomes
SANTA
Microarray
Cancer
biomaRt
genomes
13.9 years ago
Claude Chelala
▴ 40
0
votes
0
replies
1.8k
views
[job] Postdoc position on the bioinfomatics of epigenetic circuits in genome programming and reprogramming at the European Institute of Oncology in M…
RNASeq
ChIPSeq
Epigenetics
Cancer
chipseq
SANTA
RNASeq
ChIPSeq
Epigenetics
Cancer
SANTA
14.0 years ago
stefano iacus
▴ 430
0
votes
1
reply
1.5k
views
question on makeTranscriptDbFromUCSC
Cancer
rtracklayer
GenomicRanges
PING
SANTA
Cancer
rtracklayer
GenomicRanges
PING
SANTA
updated 15.2 years ago by
Ping Ma
▴ 10 • written 15.2 years ago by
Hervé Pagès
16k
0
votes
0
replies
1.1k
views
limma technical replicates and biological replicates in the same design
limma
SANTA
limma
SANTA
16.0 years ago
Naomi Altman
★ 6.0k
0
votes
0
replies
1.1k
views
Bioconductor Digest, Vol 79, Issue 20
Annotation
limma
SANTA
Annotation
limma
SANTA
16.0 years ago
Gordon Smyth
52k
0
votes
0
replies
996
views
OFF TOPIC high-density SSU rRNA microarray
Microarray
SANTA
Microarray
SANTA
16.0 years ago
Marcelo Laia
▴ 450
0
votes
0
replies
1.1k
views
[limma] Possible bug on read.maimages function ?
Annotation
limma
SANTA
Annotation
limma
SANTA
16.0 years ago
Marcelo Laia
▴ 450
0
votes
1
reply
1.5k
views
help needed on avereps function
Normalization
probe
limma
SANTA
Normalization
probe
limma
SANTA
updated 16.2 years ago by
Erika Melissari
▴ 250 • written 16.2 years ago by
Francois Pepin
★ 1.3k
0
votes
0
replies
1.6k
views
limma Time Course Experiments question
graph
limma
SANTA
graph
limma
SANTA
16.4 years ago
Marcelo Laia
▴ 450
0
votes
5
replies
2.2k
views
Expressionset from ArrayExpress processed data
ArrayExpress
SANTA
ArrayExpress
SANTA
updated 16.6 years ago by
Martin Morgan
25k • written 16.6 years ago by
Yovanny Izquierdo Núñez
▴ 20
0
votes
0
replies
1.2k
views
Job: Statistical Analyst - Affymetrix, Inc.
Microarray
Genetics
Classification
SANTA
Microarray
Genetics
Classification
SANTA
20.4 years ago
Higgs, Debi
▴ 10
0
votes
4
replies
1.7k
views
Affymetrix file parsers released under LGPL open source license
SANTA
SANTA
updated 20.7 years ago by
Harry Mangalam
▴ 60 • written 20.7 years ago by
Lelivelt, Mike
▴ 50
0
votes
1
reply
1.3k
views
PLIER is available as open source
plier
SANTA
plier
SANTA
updated 20.9 years ago by
Francois Collin
▴ 50 • written 20.9 years ago by
Lelivelt, Mike
▴ 50
0
votes
0
replies
1.1k
views
Affymetrix Postdoctoral Opportunity
Microarray
SANTA
Microarray
SANTA
21.8 years ago
VanLieu, Connie
▴ 10
18 results • Page
1 of 1
Recent ...
Replies
Comment: WGCNA analysis on RNAseq and proteoimcs data
by
sum31278
• 0
Hi sagigordon, Can you share how you performed WGCNA analysis for proteomics data? Thanks
Comment: European Bioconductor Conference 2023 planning
by
inadequate.peacock.iiag
• 0
I once faced a dilemma similar to this when coordinating a smaller local event; despite initial hesitation, I learned invaluable skills and…
Comment: ROAST compare results with complex design
by
Gordon Smyth
52k
It's also worth pointing out that the syntax for `camera` and `mroast` is the same, so I wonder how OP did the earlier `camera` analysis.
Answer: ROAST compare results with complex design
by
James W. MacDonald
68k
You are specifying that the last column of your design should be used as the contrast. You should instead use `contrast[,1]`, which will us…
Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
by
James W. MacDonald
68k
Yes. You can infer that by figuring out what each coefficient measures. Here is your design matrix: ``` > targets ID Name phase G…
Votes
Answer: ROAST compare results with complex design
How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
Awards
• All
Popular Question
to
sum31278
• 0
Popular Question
to
Gordon Smyth
52k
Popular Question
to
boczniak767
▴ 740
Popular Question
to
Young Tae
• 0
Popular Question
to
Robert Castelo
★ 3.4k
Locations
• All
Germany,
29 minutes ago
India,
46 minutes ago
WEHI, Melbourne, Australia,
1 hour ago
Germany,
1 hour ago
India,
3 hours ago
Traffic: 1046 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6