Showing : santa • reset
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limma technical replicates and biological replicates in same design
limma SANTA
16.3 years ago • updated 6.6 years ago Gordon Smyth 53k
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limma technical replicates and biological replicates in the same design
limma SANTA limma SANTA
updated 6.6 years ago by 53k • written 16.3 years ago by ▴ 450
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FOSBE 2012
SANTA SANTA
13.7 years ago mabawsa ▴ 20
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Selected probes from a given probeset
Microarray SANTA Microarray SANTA
13.8 years ago • updated 13.7 years ago Ramiro Rodríguez ▴ 30
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Bioinformatics course - October 2011 Registration is now open
Microarray Cancer biomaRt ArrayExpress genomes SANTA Microarray Cancer biomaRt genomes
14.3 years ago Claude Chelala ▴ 40
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[job] Postdoc position on the bioinfomatics of epigenetic circuits in genome programming and reprogramming at the European Institute of Oncology in M…
RNASeq ChIPSeq Epigenetics Cancer chipseq SANTA RNASeq ChIPSeq Epigenetics Cancer SANTA
14.4 years ago stefano iacus ▴ 430
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question on makeTranscriptDbFromUCSC
Cancer rtracklayer GenomicRanges PING SANTA Cancer rtracklayer GenomicRanges PING SANTA
updated 15.6 years ago by ▴ 10 • written 15.6 years ago by 16k
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limma technical replicates and biological replicates in the same design
limma SANTA limma SANTA
16.3 years ago Naomi Altman ★ 6.0k
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Bioconductor Digest, Vol 79, Issue 20
Annotation limma SANTA Annotation limma SANTA
16.3 years ago Gordon Smyth 53k
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OFF TOPIC high-density SSU rRNA microarray
Microarray SANTA Microarray SANTA
16.3 years ago Marcelo Laia ▴ 450
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[limma] Possible bug on read.maimages function ?
Annotation limma SANTA Annotation limma SANTA
16.3 years ago Marcelo Laia ▴ 450
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help needed on avereps function
Normalization probe limma SANTA Normalization probe limma SANTA
updated 16.6 years ago by ▴ 250 • written 16.6 years ago by ★ 1.3k
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limma Time Course Experiments question
graph limma SANTA graph limma SANTA
16.8 years ago Marcelo Laia ▴ 450
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Expressionset from ArrayExpress processed data
ArrayExpress SANTA ArrayExpress SANTA
updated 17.0 years ago by 25k • written 17.0 years ago by ▴ 20
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Job: Statistical Analyst - Affymetrix, Inc.
Microarray Genetics Classification SANTA Microarray Genetics Classification SANTA
20.8 years ago Higgs, Debi ▴ 10
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Affymetrix file parsers released under LGPL open source license
SANTA SANTA
updated 21.1 years ago by ▴ 60 • written 21.1 years ago by ▴ 50
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PLIER is available as open source
plier SANTA plier SANTA
updated 21.3 years ago by ▴ 50 • written 21.3 years ago by ▴ 50
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Affymetrix Postdoctoral Opportunity
Microarray SANTA Microarray SANTA
22.2 years ago VanLieu, Connie ▴ 10
18 results • Page 1 of 1
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Comment: limpa analysis advice by Gordon Smyth 53k
Yes, we use Astral currently. The main dataset in the limpa preprint is Astral. I don't see any major problems with your data and I think …
Comment: limpa analysis advice by SamGG ▴ 360
Thank you for your comments. Please note that I did not apply any filtering to the peptide intensity. The experimental protocol includes tw…
Comment: Pairwise comparison of multiple groups with different base by ja569116 • 0
Hi @mikelove I have a similar situation, and I feel that I have interpreted the results in the wrong way. In my case I would like to identi…
Comment: Are individual-mouse-based statistics possible in CellChat? by TikTsossakaas33ocissalpc • 0
Questions about comparing groups and statistical significance highlight how data driven thinking matters across fields. In online mobile ga…
Comment: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink by ja569116 • 0
Hi @atpoint Thanks for the information. Could you please expand on when to use adjusted p-values vs nominal p-values. My understanding was …
Votes
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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