Bioconductor Scrnaseq

Showing : scrnaseq • reset

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890

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SingleCell RNASeq RNASeqData scRNAseq

updated 9 days ago by wichaidi • 0 • written 17 months ago by irvin.ng • 0

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122

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scRNAseq RNAseq

updated 16 days ago by ATpoint ★ 4.0k • written 18 days ago by Merav • 0

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198

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CellRanger emptyDrops scRNAseq 10X

5 weeks ago rocanja ▴ 60

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241

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scRNAseq

updated 8 weeks ago by ATpoint ★ 4.0k • written 8 weeks ago by sodiogoes • 0

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781

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scRNAseq quickcluster scRNA scran

4 months ago ruba-mahmoud • 0

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3.4k

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scRNAseq

updated 5 months ago by Manuel • 0 • written 10 months ago by Elham • 0

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671

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scrna scRNAseq

updated 6 months ago by Gabriella • 0 • written 13 months ago by sarah.jobbins • 0

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492

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scRNAseq

6 months ago Momo • 0

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838

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scRNAseq edgeR SingleCellExperiment

8 months ago duez.tolga • 0

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380

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Rstudio scRNAseq DESeq2

updated 8 months ago by ATpoint ★ 4.0k • written 8 months ago by DrFizz • 0

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990

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scRNAseq RStudio DESeq2

updated 8 months ago by ATpoint ★ 4.0k • written 8 months ago by DrFizz • 0

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1.0k

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scRNAseq scrna paireddesign edgeR pseudobulking

updated 8 months ago by Gordon Smyth 50k • written 8 months ago by garcia • 0

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413

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scRNA scRNAseq

updated 8 months ago by ATpoint ★ 4.0k • written 9 months ago by Omer • 0

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553

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topGO scRNAseq

updated 9 months ago by Basti ▴ 780 • written 9 months ago by Francesco • 0

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345

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scRNAseq

9 months ago Jiyuan • 0

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1.3k

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smart-seq2 scRNAseq scran

10 months ago Lluís Revilla Sancho ▴ 730

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471

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Workshop scRNAseq

11 months ago info ▴ 10

17 results • Page 1 of 1

Recent ...

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Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k

Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…

Answer: ATACseq merge peaks by ATpoint ★ 4.0k

That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…

Votes

Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length

Comment: Deseq2. decontXcounts not integers. Useful alternative?

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

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