Showing : emptyDrops • reset
0
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11
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1.0k
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emptyDrops new default alpha = Inf giving far fewer non-empty droplets than under old default of alpha = NULL
scrn 10x scRNAseq emptyDrops DropletUtils
5 months ago Peter Hickey ▴ 760
0
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2
replies
1.2k
views
Non-empty droplets versus good quality cells
CellRanger emptyDrops scRNAseq 10X
22 months ago rocanja ▴ 60
0
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1
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1.6k
views
Choosing the right lower limit for emptyDrops
SingleCell emptyDrops 10X
updated 2.7 years ago by ▴ 760 • written 2.7 years ago by • 0
4
votes
5
replies
4.6k
views
`emptyDrops()` calling 'too many' non-empty droplets
DropletUtils emptyDrops scRNA scRNAseq 10x
3.5 years ago • updated 3.4 years ago Peter Hickey ▴ 760
1
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1
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1.6k
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Number of non-empty drops returned by emptyDrops() depends on value of test.ambience
DropletUtils emptyDrops 10x
updated 5.0 years ago by ★ 29k • written 5.0 years ago by ▴ 760
4
votes
5
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3.1k
views
emptyDrops identified less non-empty cells with lower total UMI counts?
DropletUtils scRNA-seq emptyDrops simplesinglecell cell calling
updated 5.2 years ago by ★ 29k • written 6.4 years ago by ▴ 140
5
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1
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5.6k
views
Error with DropletUtils::EmptyDrops()
DropletUtils EmptyDrops simpleSingleCell
updated 3.4 years ago by ▴ 40 • written 6.4 years ago by ▴ 20
0
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2
replies
1.7k
views
Scalability of emptyDrops() running times
dropletutils emptydrops
updated 6.7 years ago by ★ 29k • written 6.7 years ago by • 0
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