Bioconductor 10X

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labels PBMC SingleCellMultiModal 10X

updated 4 weeks ago by ATpoint ★ 4.8k • written 4 weeks ago by javier.ruizramirez • 0

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808

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CellRanger emptyDrops scRNAseq 10X

13 months ago rocanja ▴ 60

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1.2k

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SingleCell emptyDrops 10X

updated 2.0 years ago by Peter Hickey ▴ 750 • written 2.0 years ago by sandra.garces.19 • 0

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1.1k

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RNAseq 10X

2.1 years ago wt215 • 0

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3.7k

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DropletUtils emptyDrops scRNA scRNAseq 10x

2.8 years ago • updated 2.7 years ago Peter Hickey ▴ 750

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1.4k

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DropletUtils emptyDrops 10x

updated 4.3 years ago by Aaron Lun ★ 28k • written 4.3 years ago by Peter Hickey ▴ 750

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1.9k

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deseq2 zinbwave 10X scRNA-seq Differential expression

updated 4.8 years ago by Michael Love 43k • written 4.8 years ago by vincent.croset ▴ 20

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3.5k

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10x scrna-seq

updated 6.0 years ago by Aaron Lun ★ 28k • written 6.0 years ago by jma1991 ▴ 70

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8.8k

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single-cell 10X Cell calling DropletUtils cellranger

updated 6.2 years ago by Aaron Lun ★ 28k • written 6.2 years ago by xingxd16 ▴ 20

9 results • Page 1 of 1

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Comment: EuroBioC2023 abstract submission is open! by arden • 0

Woohoo! Abstract submission for EuroBioC2023 is open! Time to dust off my research and get those submissions ready. Hope to see some awesom…

Comment: Gene Ontology (GO) Analysis by GA ▴ 10

Thank you!

Comment: DESEQ2 - Correctly altering log2foldchange when switching comparison direction ( by sk • 0

If I use factor to create the Condition_SCR_vs_WT coef, then the other chefs would be Condition_KD1_vs_WT and Condition_KD2_vs_WT, but I ne…

Comment: How to load scRNA-seq data from GEO by petergrahamclark • 0

the paper I'm working off suggests removing all cells where the UMI is less than 2000. I assume we don't have enough data for umi counts. c…

Comment: How to load scRNA-seq data from GEO by Gordon Smyth 52k

I suggest you use readMM() as advised by James, but then do a massive amount of cell filtering before doing any other conversions or creati…

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Comment: How to load scRNA-seq data from GEO

limma correction for tumor purity

Answer: limma correction for tumor purity

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