Bioconductor Segfault

Showing : segfault • reset

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1.7k

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edgeR segfault

updated 2.0 years ago by ATpoint ★ 5.0k • written 2.0 years ago by jonas.freimuth ▴ 20

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3.1k

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R S4Vectors segfault

updated 6.7 years ago by Martin Morgan 25k • written 6.7 years ago by ecg1g15 ▴ 30

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1.6k

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justrma customCDF segfault

updated 6.8 years ago by Daniel ▴ 10 • written 10.0 years ago by maria.lehtivaara • 0

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1.6k

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msa segfault

7.5 years ago jmh5ad ▴ 40

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2.3k

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qvalue segfault

11.1 years ago • updated 7.7 years ago Leonardo Collado Torres ★ 1.1k

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12k

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pathview segfault

updated 9.3 years ago by redpick13 ▴ 40 • written 9.9 years ago by user31888 ▴ 30

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2.3k

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rsubread align segfault

updated 9.4 years ago by Wei Shi ★ 3.6k • written 9.4 years ago by gerard_llimos ▴ 10

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2.0k

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gsva segfault

updated 9.5 years ago by Robert Castelo ★ 3.4k • written 9.5 years ago by Rajarshi Guha ▴ 120

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1.6k

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gcrma segmentation fault segfault

updated 9.6 years ago by James W. MacDonald 68k • written 9.6 years ago by kazi • 0

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1.6k

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shortread segfault

9.9 years ago Watal M. Iwasaki ▴ 10

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3.5k

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glm edger lapack segfault ruvseq

10.3 years ago Mark.Rogers • 0

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2.5k

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rhdf5 segfault

10.5 years ago Kort, Eric ▴ 220

12 results • Page 1 of 1

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Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

we can investigate this issue. thank you for bringing it to our attention

Comment: deseq2 filter the low counts by Michael Love 43k

> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…

Comment: deseq2 filter the low counts by empty_mt • 0

Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …

Comment: deseq2 filter the low counts by Michael Love 43k

Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering

Votes

Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

Answer: Important: Bioconductor Release 3.22 Delayed

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