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align
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SUBREAD Aligning reads with reference genome - Error in align The number of input file names is different from the number of output file names.
align
Alignment
subread
5 weeks ago
saira
• 0
2
votes
2
replies
378
views
Rsubread doesn't output a .bai file
Rsubread
align
Alignment
updated 10 months ago by
Gordon Smyth
45k • written 10 months ago by
mike_flower
• 0
1
vote
5
replies
634
views
Error: Input Files have different Amount of Reads
SubRead
Align
Subjunc
updated 22 months ago by
James W. MacDonald
59k • written 22 months ago by
abano
• 0
0
votes
4
replies
454
views
segfault "memory not mapped" using align from Rsubread
Rsubread
align
2.1 years ago
Joseph Fass
▴ 70
5
votes
6
replies
784
views
Rsubread malloc(): memory corruption
Rsubread
malloc
align
updated 2.6 years ago by
Gordon Smyth
45k • written 2.7 years ago by
Konstantinos Yeles
▴ 70
5
votes
6
replies
723
views
Improving the performance of the align function from Rsubread for old Roche454 reads
align
rsubread
roche454
rnaseq
updated 3.1 years ago by
Wei Shi
★ 3.4k • written 3.1 years ago by
Raito92
▴ 60
0
votes
9
replies
1.2k
views
mapping FASTQ files to single gene (fluorescent reporter)
rsubread
alignment
align
3.5 years ago
A
▴ 40
1
vote
5
replies
1.1k
views
Error using Rsubread align: caugh segfault invalid permissions
rsubread
align
segfault
updated 6.0 years ago by
Wei Shi
★ 3.4k • written 6.0 years ago by
gerard_llimos
▴ 10
0
votes
1
reply
1.2k
views
RSubread 0% mapping
rsubread
mapping
featurecounts
align
6.4 years ago
Jo
▴ 20
9 results • Page
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Comment: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
by
James W. MacDonald
59k
We have progressed past the point where I show you how to do things using Bioconductor packages, and into the realm where I start telling y…
Comment: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
by
Yang Shi
• 0
Thanks sir! As your mentioned here, 12-15 means cutoff value about 4? Could I select the reflection point as the "point" that starts to ha…
Comment: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
by
James W. MacDonald
59k
It's a non-scientific selection. The Nonspecific probes are meant to be sequences that are not found in nature, so any binding is due to cr…
Comment: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
by
Yang Shi
• 0
Thanks for your excellent reply sir! But there are still some points confused me. (1).dbGetQuery get 93 kinds of probes. Would be okay for …
Comment: Print EnhancedVolcano Plot as jpeg or similar in R Notebook
by
Kevin Blighe
3.5k
Great! problem solved, then?
Votes
Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
Comment: Quantile Normalization after rma or not?
Comment: Print EnhancedVolcano Plot as jpeg or similar in R Notebook
Comment: How to best visualize multi-level transcriptomics experiment data?
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