Bioconductor Segmentation

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BAM Segmentation CINdex VCF Data

3.3 years ago raven1306 • 0

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1.2k

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PureCN CNV CNA segmentation calculateTangentNormal

updated 6.0 years ago by markus.riester ▴ 130 • written 6.0 years ago by sruddy17 • 0

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segmentation reference CNA TCGA

6.9 years ago jlarsen728 • 0

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classification segmentation cell types image analysis crimage

7.3 years ago Jenny.chien • 0

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2.2k

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TCGA Cancer dnacopy segmentation

updated 8.4 years ago by markus.riester ▴ 130 • written 8.4 years ago by Luisa672 • 0

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1.8k

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dnacopy segmentation CBS

updated 8.8 years ago by Venkat Seshan ▴ 30 • written 8.8 years ago by W. C. ▴ 10

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1.6k

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gcrma segmentation fault segfault

updated 9.7 years ago by James W. MacDonald 68k • written 9.7 years ago by kazi • 0

7 results • Page 1 of 1

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Comment: Question about RE-agnostic mode for intact Hi-C and Micro-C normalization(HiCDCP by TikTsoksocissalpc • 0

Normalizing complex datasets like Hi C can be challenging, much like setting up a PC for optimal gaming performance. Just as careful tuning…

Comment: p.adjust BH Question by TikTsoksocissalpc • 0

Thanks for sharing your question about RMA limma analysis While working on your experiment, it s always helpful to have some background mu…

Answer: NUPOP usage by shepherl 4.2k

You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…

Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0

In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …

Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150

Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?

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C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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