Bioconductor Seqinfo

Showing : seqinfo • reset

2

votes

4

replies

2.0k

views

BSgenome seqinfo

3.6 years ago alain.corvisier • 0

4

votes

1

reply

1.7k

views

GRanges seqinfo import.bw BigWigFile rtracklayer

updated 6.6 years ago by Michael Lawrence ★ 11k • written 6.6 years ago by maltethodberg ▴ 180

7

votes

5

replies

2.5k

views

bsseq genomeinfodb genomicranges seqinfo

written 7.5 years ago by rcavalca ▴ 140

1

vote

3

replies

2.0k

views

GenomeInfoDb Seqinfo 404 error

8.8 years ago • updated 8.7 years ago bastien.herve • 0

4 results • Page 1 of 1

Recent ...

Replies

Comment: Bioconductor 3.22 Released! by residentialplayt • 0

Every run balances on the line between control and collapse. That where [Run3][1] lives on the razor thin edge of reaction, where hesitatio…

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

we can investigate this issue. thank you for bringing it to our attention

Comment: deseq2 filter the low counts by Michael Love 43k

> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…

Comment: deseq2 filter the low counts by empty_mt • 0

Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …

Votes

Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

Answer: Important: Bioconductor Release 3.22 Delayed

Awards • All