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seqinr
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Seqinr for FASTQ files?
fastq
fast
seqinr
updated 2.1 years ago by
ATpoint
★ 4.1k • written 2.1 years ago by
hank00000
• 0
0
votes
0
replies
1.1k
views
Match peptide within protein sequence fasta and extract position information based on protein sequence
R
seqinr
biostrings
5.7 years ago
rabalski
• 0
0
votes
1
reply
741
views
SeqinR socketConnection error help?
seqinr
updated 5.7 years ago by
Martin Morgan
25k • written 5.7 years ago by
daviqd.halvorsen
• 0
0
votes
0
replies
963
views
Sequencing database tool in R: tracking Sanger and NGS of large-scale directed evolution projects
rmysql
fastq
seqinr
ngs
sangerseqr
6.0 years ago
JoeMG
• 0
2
votes
1
reply
4.6k
views
Reading fasta file with multiple sequences
multiple sequences
bioconductor
rstudio
seqinr
updated 7.2 years ago by
Martin Morgan
25k • written 7.2 years ago by
Riot
• 0
1
vote
1
reply
1.2k
views
Given a multifasta file and for each sequence, shuffle middle part of the sequence leaving the flanks intact and the opposite
shuffle
regioner
seqinr
updated 7.4 years ago by
Martin Morgan
25k • written 7.4 years ago by
Dimitris Polychronopoulos
▴ 80
1
vote
7
replies
3.2k
views
seqinr package - choosebank() function not connecting
seqinr
choose bank
error message
updated 8.1 years ago by
Martin Morgan
25k • written 8.1 years ago by
jayanthisahithi
▴ 10
4
votes
3
replies
3.7k
views
a package for read.fasta
seqinr
fasta
updated 8.7 years ago by
Hervé Pagès
16k • written 8.7 years ago by
Angel
▴ 40
8 results • Page
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Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma
by
Gordon Smyth
50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Gordon Smyth
50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
In that case both time and treatment are identical things, so choose one and go with it.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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