Bioconductor Regioner

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1.1k

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annotatr regioneR gkmSVM

updated 5 months ago by Mahmoud • 0 • written 3.3 years ago by rohitsatyam102 ▴ 20

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881

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regioneR granges iranges

updated 3.5 years ago by bernatgel ▴ 150 • written 3.9 years ago by Angel Liang • 0

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672

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regioneR

updated 4.6 years ago by bernatgel ▴ 150 • written 4.6 years ago by shoko • 0

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885

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regioneR

4.8 years ago AlejandroMA • 0

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645

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regioneR

updated 5.0 years ago by bernatgel ▴ 150 • written 5.0 years ago by Miss Agnieszka Aleksandra Golicz ▴ 40

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651

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regioneR

updated 5.0 years ago by bernatgel ▴ 150 • written 5.0 years ago by Miss Agnieszka Aleksandra Golicz ▴ 40

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653

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regioner

5.8 years ago peds09 • 0

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822

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regioner permtest

6.1 years ago linuxborg2 • 0

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1.9k

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regioneR permTest

6.1 years ago linuxborg2 • 0

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1.2k

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regioneR

updated 6.4 years ago by bernatgel ▴ 150 • written 6.4 years ago by gonzalpk ▴ 10

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3.1k

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regioner overlappingpeaks

updated 7.0 years ago by bernatgel ▴ 150 • written 7.0 years ago by tharveshliyakat ▴ 10

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1.2k

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regioneR

updated 7.3 years ago by bernatgel ▴ 150 • written 7.3 years ago by Vinicius Henrique da Silva ▴ 40

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1.2k

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shuffle regioner seqinr

updated 7.4 years ago by Martin Morgan 25k • written 7.4 years ago by Dimitris Polychronopoulos ▴ 80

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1.3k

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regioneR

updated 7.8 years ago by bgel ▴ 30 • written 7.8 years ago by andreucat91 • 0

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1.3k

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regioner

updated 8.0 years ago by Martin Morgan 25k • written 8.0 years ago by rcavalca ▴ 140

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955

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genomicranges regioneR width

updated 8.2 years ago by bernatgel ▴ 150 • written 8.2 years ago by Ludo Pagie ▴ 40

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1.8k

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regioneR GRanges GCcontent

updated 8.4 years ago by bernatgel ▴ 150 • written 8.4 years ago by Dimitris Polychronopoulos ▴ 80

17 results • Page 1 of 1

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Comment: Deseq2. decontXcounts not integers. Useful alternative? by ATpoint ★ 4.0k

I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…

Answer: Improving the design matrices vignette in RNAseq123 by Gordon Smyth 50k

Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0

Thank you for your comment! I'll review my code from top to bottom.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Votes

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

Awards • All

Scholar to James W. MacDonald 65k

Supporter to JKim • 0