Showing : shrinkage • reset
1
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3
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1.2k
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DESeq differential expression results are too stringet. How to relax my criteria
shrinkage DifferentialExpression DESeq2
updated 2.1 years ago by ★ 4.9k • written 2.1 years ago by ▴ 10
1
vote
2
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1.4k
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running apeglm on a normal model and multiple coefficients
shrinkage apeglm
3.4 years ago Frederik Ziebell ▴ 30
2
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8
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3.3k
views
DESeq2 : log2FC discrepencies between results and lfcShrink
deseq2 shrinkage
updated 2.8 years ago by 43k • written 5.5 years ago by ▴ 20
0
votes
2
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1.6k
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DESeq2: qualitatively different results between deseq2 v1.14 and deseq2 v1.22 when run with shrinkage
deseq2 shrinkage
updated 6.7 years ago by 43k • written 6.7 years ago by • 0
1
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8
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4.9k
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DESeq2: betaPrior changes significance dramatically
deseq2 betaPrior shrinkage significance
7.3 years ago brynedal ▴ 40
0
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3
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1.7k
views
disagreement between log2FoldChange and lfcMLE in DESeq2
deseq2 log2fc shrinkage
updated 7.7 years ago by 43k • written 7.7 years ago by ▴ 90
6 results • Page 1 of 1
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Comment: EuroBioC2024 abstract submission is open! by Finnianfly • 0
What specific requirements should be noted when preparing abstracts for presentation formats such as short talks, package demos, or posters…
Comment: Length of 'dimnames' [1] not equal to array extent by Francesco Silvestro • 0
Resolved the error message!
Comment: WGCNA analysis on RNAseq and proteoimcs data by sum31278 • 0
Hi sagigordon, Can you share how you performed WGCNA analysis for proteomics data? Thanks
Comment: European Bioconductor Conference 2023 planning by inadequate.peacock.iiag • 0
I once faced a dilemma similar to this when coordinating a smaller local event; despite initial hesitation, I learned invaluable skills and…
Comment: ROAST compare results with complex design by Gordon Smyth 52k
It's also worth pointing out that the syntax for `camera` and `mroast` is the same, so I wonder how OP did the earlier `camera` analysis.
Votes
Answer: ROAST compare results with complex design
How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
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