Bioconductor Ssgsea

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254

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DESeq2 GSVA ssGSEA

updated 21 days ago by Robert Castelo ★ 3.3k • written 23 days ago by michelafrancesconi8 • 0

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819

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ssgsea GSVA biotype proteincoding msigdb

updated 6 months ago by Robert Castelo ★ 3.3k • written 6 months ago by snijesh ▴ 20

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5.8k

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enrichment GSVA enrichplot ssGSEA

updated 2.2 years ago by Robert Castelo ★ 3.3k • written 2.2 years ago by Davide • 0

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2.2k

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gsea ssgsea gsva pathways

updated 3.9 years ago by Robert Castelo ★ 3.3k • written 3.9 years ago by igor ▴ 50

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20k

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ssgsea gsva piano egsea

updated 6 months ago by amin8w ▴ 10 • written 6.9 years ago by sina.nassiri ▴ 130

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2.4k

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gsea gsva ssgsea

6.4 years ago jaison75 ▴ 20

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3.4k

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gsva ssgsea

8.6 years ago Momeneh Foroutan ▴ 10

7 results • Page 1 of 1

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Answer: biomaRt has encountered an unknown server error while using getLDS by Mike Smith ★ 6.5k

There's a lot to unpack here! First, unfortunatley the getLDS funciontallity started failing with the release of BioMart 106. I've aske…

Comment: Most enriched pathway is not expressed when modifying universe parameter by adripel • 0

Well, I was looking at the result table (enrich18k@result, or yy@result in your example), and it gives every pathway even the non-significa…

Comment: Trouble reading samplesheet in with diffbind to create dba by Mallory • 0

Thank you for your reply! There mustve been something wierd going on with my peak formats as you pointed out. I recalled all the peaks and …

Answer: Trouble reading samplesheet in with diffbind to create dba by Anthony • 0

I was struggling with this today too. For me it happened because my peak files were not in the correct format. The "10 elements" refers to …

Comment: gds in GEOmetadb 2023-06-26 version is empty by Frederico Moraes Ferreira ▴ 100

Try axel -n 20 https://gbnci.cancer.gov/geo/GEOmetadb.sqlite.gz

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Answer: biomaRt has encountered an unknown server error while using getLDS

A: limma: comparison of repeat measurements - blocking or within-subject correlatio

A: dream vignette says limma-voom repeated measures two-group comparison needs two

Answer: Get the latest gene name from Entrez ID

Get the latest gene name from Entrez ID

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Popular Question to Alejandro Reyes ★ 1.9k