Bioconductor Starr

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971

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starr chip-chip

7.9 years ago sudhirjadhao2009 • 0

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limma ringo starr

9.6 years ago ashubiochem • 0

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1.7k

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Ringo affy tilingarray plot starr

9.7 years ago bruce.moran ▴ 30

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1.2k

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Starr Starr

updated 11.0 years ago by Julie Zhu ★ 4.3k • written 11.0 years ago by Paul ▴ 10

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Starr Starr

11.0 years ago Julie Zhu ★ 4.3k

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Starr Starr

updated 13.4 years ago by Kasper Daniel Hansen ★ 6.5k • written 13.4 years ago by Guest User ★ 13k

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971

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GO Starr GO Starr

updated 13.8 years ago by Martin Morgan 25k • written 13.8 years ago by Yongde Bao ▴ 170

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Starr Starr

updated 14.0 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 14.1 years ago by Feseha Abebe-Akele ▴ 30

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GO Yeast tilingArray Starr GO Yeast tilingArray Starr

14.5 years ago Noah Dowell ▴ 410

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Normalization vsn Starr Normalization vsn Starr

updated 14.7 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 14.7 years ago by Edwin Groot ▴ 230

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1.9k

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Yeast ChIPpeakAnno Starr Yeast ChIPpeakAnno Starr

updated 14.8 years ago by Julie Zhu ★ 4.3k • written 14.8 years ago by Noah Dowell ▴ 410

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Normalization Starr Normalization Starr

updated 14.9 years ago by Raphael Gottardo ▴ 40 • written 14.9 years ago by Hans-Ulrich Klein ▴ 330

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Annotation Starr Annotation Starr

updated 15.3 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 15.3 years ago by Noah Dowell ▴ 410

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biomaRt Ringo Starr biomaRt Ringo Starr

updated 15.3 years ago by Wolfgang Huber ★ 13k • written 15.3 years ago by Noah Dowell ▴ 410

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952

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Normalization Starr Normalization Starr

updated 15.3 years ago by Martin Morgan 25k • written 15.3 years ago by Noah Dowell ▴ 410

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Transcription Normalization Yeast probe affy graph tilingArray oligo pdInfoBuilder Starr

updated 15.4 years ago by Tobias Straub ▴ 430 • written 15.4 years ago by Noah Dowell ▴ 410

16 results • Page 1 of 1

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Comment: DiffBind custom normalization factor by Abbie • 0

Hello! Thanks so much for adding dba.normalize and all the documentation in the manual! I'm hoping I can ask a follow-up question here. I…

Answer: CpGs with genomic positions greater than the chromosome size in EPICv2? by James W. MacDonald 68k

All of the annotation packages provided by Bioconductor are simply repackaging of existing data from one or more sources. In this case, the…

Comment: Using TPM from tximport of Salmon output for singscore by Kent • 0

Thank you for the suggestions Michael. Would you say that after filtering out the low count genes, `rlog(counts, blind = T)` is doing the s…

Comment: Using TPM from tximport of Salmon output for singscore by Michael Love 43k

For clustering generally we recommend `vst()` see the workflow for example. For working with individual samples, I can see how a scaling/t…

Comment: DESeq2 model - How to test case/control time course model when taking account wi by Michael Love 43k

I'd recommend working with a local statistician or someone familiar with linear models in R. I have to reserve my time on the support site …

Votes

clusterProfiler-GO enrichment Error

A: Machine learning in R book

Data preparation and Machine learning on time course RNAseq data

Answer: Use of org.Rn.eg.db with GRCr8 reference genome

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