Bioconductor Starr

Showing : starr • reset

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starr chip-chip

7.6 years ago sudhirjadhao2009 • 0

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limma ringo starr

9.3 years ago ashubiochem • 0

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Ringo affy tilingarray plot starr

9.4 years ago bruce.moran ▴ 30

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Starr Starr

updated 10.7 years ago by Julie Zhu ★ 4.3k • written 10.7 years ago by Paul ▴ 10

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Starr Starr

10.7 years ago Julie Zhu ★ 4.3k

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Starr Starr

updated 13.0 years ago by Kasper Daniel Hansen ★ 6.5k • written 13.0 years ago by Guest User ★ 13k

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GO Starr GO Starr

updated 13.5 years ago by Martin Morgan 25k • written 13.5 years ago by Yongde Bao ▴ 170

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Starr Starr

updated 13.7 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 13.8 years ago by Feseha Abebe-Akele ▴ 30

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GO Yeast tilingArray Starr GO Yeast tilingArray Starr

14.2 years ago Noah Dowell ▴ 410

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Normalization vsn Starr Normalization vsn Starr

updated 14.3 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 14.3 years ago by Edwin Groot ▴ 230

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Yeast ChIPpeakAnno Starr Yeast ChIPpeakAnno Starr

updated 14.5 years ago by Julie Zhu ★ 4.3k • written 14.5 years ago by Noah Dowell ▴ 410

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Normalization Starr Normalization Starr

updated 14.6 years ago by Raphael Gottardo ▴ 40 • written 14.6 years ago by Hans-Ulrich Klein ▴ 330

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997

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Annotation Starr Annotation Starr

updated 15.0 years ago by zacher@lmb.uni-muenchen.de ▴ 50 • written 15.0 years ago by Noah Dowell ▴ 410

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biomaRt Ringo Starr biomaRt Ringo Starr

updated 15.0 years ago by Wolfgang Huber ★ 13k • written 15.0 years ago by Noah Dowell ▴ 410

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895

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Normalization Starr Normalization Starr

updated 15.0 years ago by Martin Morgan 25k • written 15.0 years ago by Noah Dowell ▴ 410

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Transcription Normalization Yeast probe affy graph tilingArray oligo pdInfoBuilder Starr

updated 15.1 years ago by Tobias Straub ▴ 430 • written 15.1 years ago by Noah Dowell ▴ 410

16 results • Page 1 of 1

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Comment: Struggle with the replicates of epic array data by Melisa Tecik • 0

Thanks you so much for the instructions. I also tried M values as you suggested but sadly the result was the same. Apparently, the problem …

Answer: bioconductor packages on bioconda by James W. MacDonald 67k

The bioconda people are responsible for bioconda, so you should ask them if/when they are going to update.

Answer: txdb.mmusculus.ucsc.mm10.knowngene issue on X chromosome by James W. MacDonald 67k

The default for `plotKaryotype` is to use hg19.

Comment: Is it possible to parallelise saveHDF5SummarizedExperiment by Stefano Mangiola ▴ 20

saveTileDBSummarizedExperiment would be awesome. I think we need performance for execution time and memory required to save.

Comment: Create Illmina bead summary data by Liu • 0

Hi! Yes, thank you! I completely agree. I am just curious about how these two files are processed with AVG_Gre and detection p-value. I am …

Votes

Filtering low variance genes for WGCNA

A: Filtering low variance genes for WGCNA

Answer: Struggle with the replicates of epic array data

Answer: bioconductor packages on bioconda

Appropriate use of the function treat of the limma package

Awards • All

Scholar to James W. MacDonald 67k