Showing : tilingarray • reset
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Mapping Affymetrix Arabidopsis Tiling Array 1.0R in Integrated Genome Browser
bioconductor affy tilingarray
8.3 years ago jmtepp • 0
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Ringo Plots Only Partially Made
Ringo affy tilingarray plot starr
9.7 years ago bruce.moran ▴ 30
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undocumented behavior in tilingArray::costMatrix [Scanned]
tilingArray tilingArray
12.6 years ago Du, Yang ▴ 10
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tilingArray getting started questions
GO Yeast tilingArray Starr GO Yeast tilingArray Starr
14.5 years ago Noah Dowell ▴ 410
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Help with Oligo Package: Extracting and Graphing
Transcription Normalization Yeast probe affy graph tilingArray oligo pdInfoBuilder Starr
updated 15.3 years ago by ▴ 430 • written 15.3 years ago by ▴ 410
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tilingArray: error message in function segment()
tilingArray tilingArray
16.0 years ago Hui Tang ▴ 20
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tilingArray problems
Normalization GO tilingArray Normalization GO tilingArray
16.3 years ago Wolfgang Huber ★ 13k
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TilingArray Normalization
Transcription Normalization probe tilingArray Transcription Normalization probe tilingArray
updated 16.3 years ago by ★ 13k • written 16.3 years ago by ▴ 90
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tilingArray problems
tilingArray tilingArray
16.3 years ago Anjan Purkayastha ▴ 90
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1.3k
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applicability of tilingArray package
Normalization Yeast affy tilingArray Normalization Yeast affy tilingArray
updated 16.4 years ago by ★ 13k • written 16.4 years ago by ▴ 50
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tilingArray- normalizeByReference
probe tilingArray probe tilingArray
16.4 years ago Anjan Purkayastha ▴ 90
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combining data from two R arrays
GO Survival annotate genefilter vsn tilingArray GO Survival annotate genefilter vsn
17.4 years ago Richard Harrison ▴ 70
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running time of snapCGH processCGH and runDNAcopy
aCGH Survival CGH annotate genefilter affy DNAcopy aCGH GLAD tilingArray snapCGH aCGH
updated 17.4 years ago by ▴ 230 • written 17.4 years ago by ▴ 110
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Chromosome 23 and 24 dropped after run snapCGH processCGH
aCGH Survival Cancer annotate genefilter affy DNAcopy aCGH GLAD tilingArray snapCGH
updated 17.4 years ago by ▴ 40 • written 17.4 years ago by ▴ 110
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Stuck with Yeast Tiling Array
tilingArray tilingArray
updated 17.5 years ago by ▴ 730 • written 17.5 years ago by ▴ 70
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Normalization in davidTiling demo
Normalization GO Survival Biobase genefilter geneplotter affy vsn PROcess tilingArray GO
updated 18.0 years ago by ★ 13k • written 18.0 years ago by ★ 1.3k
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Normalization in davidTiling demo
Normalization GO Survival genefilter geneplotter affy vsn tilingArray affyio GO Survival
updated 18.0 years ago by ★ 13k • written 18.0 years ago by ★ 1.3k
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Scripts to handle array CGH data files from NimbleGen
CGH tilingArray CGH tilingArray
updated 18.5 years ago by ▴ 40 • written 18.5 years ago by ▴ 140
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FW: Cannot restore saved data in .Rdata after loading tilingArray - object 'breakpoints' not found
Cancer Breast PROcess tilingArray snapCGH Cancer Breast PROcess tilingArray snapCGH
updated 18.5 years ago by ★ 13k • written 18.5 years ago by ▴ 310
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tiling/SNP microarrays
SNP Coverage tilingArray SNP Coverage tilingArray
updated 18.7 years ago by 21k • written 18.7 years ago by ▴ 10
20 results • Page 1 of 1
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Answer: Using tximport for kallisto aligned TOIL data by James W. MacDonald 68k
If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …
Answer: Reading gene expression data in GPR format and converting it to xlsx format by James W. MacDonald 68k
Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …
Comment: concentration tables suitable as input for new packages? by wilkinson • 0
I am grateful for your response. Software such as "Spectra" may parse MS-data to generate tables of concentrations, for instance. But inste…
Comment: Removing UTR from GTF for gene quantification by ATpoint ★ 4.7k
Consider asking at biostars or bioinformatics reddit, since this is not directly related to a Bioconductor problem. Anyway, a couple of th…
Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Hoover • 0
I got it! ([Drift Boss][1]) [1]: https://driftbossgame.co
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Answer: Differential expression of proteins using somascan data
Answer: Surprising behavior for DEXseq dispersion estimate plot?
Answer: Handle zero effective gene length when tximport RSEM results
Handle zero effective gene length when tximport RSEM results
How to remove genes with 0 counts in tximport?
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