Showing : timeseriesexperiment • reset
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Time serious analysis Wald test in results()
DESeq2 TimeSeriesExperiment
updated 19 months ago by 42k • written 19 months ago by • 0
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Time-series analyses of a multifactor design with DESeq2
DESeq2 MultipleFactors TimeSeriesExperiment
updated 20 months ago by 42k • written 20 months ago by • 0
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DESeq2 time course and dosage response
LRT Design DESeq2 doseResponse TimeSeriesExperiment
updated 2.7 years ago by 42k • written 2.7 years ago by • 0
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800
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Deseq2 contrasts and design for paired analysis
TimeSeriesExperiment RNASeq design DESeq2
updated 2.4 years ago by 42k • written 2.4 years ago by • 0
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time course microarray data ArrayExpress database
R GillespieColin ArrayExpress import TimeSeriesExperiment
updated 7 months ago by ▴ 40 • written 19 months ago by ▴ 20
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limma: pvalues for coefficients topTable
TimeSeriesExperiment Regression top limma
updated 2.7 years ago by 65k • written 2.7 years ago by • 0
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Time series analysis - DESeq2
TimeSeriesExperiment
updated 3.0 years ago by 42k • written 3.0 years ago by ▴ 10
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Comparison between treatment timepoints in a single timeseries (control is first timepoint)
DESeq2 single-timeseries TimeSeriesExperiment
updated 19 months ago by 42k • written 20 months ago by • 0
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Proteomics-time series with repeated measures
Proteomics limma repeatedmeasures TimeSeriesExperiment
18 months ago proteome_AO • 0
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Job: Biostatistics Research Associate, York, UK
QTL fourier TimeSeriesExperiment timecoursedata
3.1 years ago Daphne • 0
10 results • Page 1 of 1
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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k
> Any suggestions for methylation data segmentation? I think the same segmentation can be used.
Comment: deseq2 results by swbarnes2 ★ 1.3k
Cross-posted https://www.biostars.org/p/9594331/#9594458
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Mike Smith ★ 6.5k
The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…
Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70
Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.
Comment: Extremely small p-values using Limma for proteomic data by Robert Castelo ★ 3.3k
From the point of view of visualization, I find handy the fact that raw p-values give more resolution than adjusted ones, which allows one …
Votes
A: Volcanoplot with limma - RAW P-values or Adj.P-Values
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
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