Showing : import • reset
4
votes
5
replies
2.1k
views
time course microarray data ArrayExpress database
R GillespieColin ArrayExpress import TimeSeriesExperiment
updated 9 months ago by ▴ 40 • written 21 months ago by ▴ 20
0
votes
1
reply
747
views
Import and Analyze 4 GSE12050_GSM304448.gpr microarrays files
.gpr raw Agilent MicroarrayData import
updated 2.7 years ago by 51k • written 2.7 years ago by • 0
0
votes
2
replies
1.5k
views
Error: $ operator is invalid for atomic vectors
import
3.1 years ago Ofelia • 0
0
votes
5
replies
1.8k
views
rtracklayer::import() BigWig issue on windows (solved)
software error BigWig import windows
4.3 years ago lsilva.m • 0
1
vote
2
replies
877
views
Support for import of custom matrix data in the ddCt R package
ddCt import analysis R qRTPCR
updated 4.9 years ago by ▴ 120 • written 4.9 years ago by ▴ 10
3
votes
3
replies
1.5k
views
Bug in rtracklayer::import of amino acid fasta sequences
rtracklayer fasta import Biostrings
updated 5.5 years ago by ★ 11k • written 5.5 years ago by ▴ 120
3
votes
15
replies
3.2k
views
(Big)wig file of complete chromosome
bigwig rtracklayer import granges grangeslist
updated 7.0 years ago by ★ 11k • written 7.0 years ago by ★ 1.5k
3
votes
2
replies
1.1k
views
Import gff from character?
rtracklayer gff gtf import import.gff3
updated 7.0 years ago by 25k • written 7.0 years ago by ▴ 20
2
votes
1
reply
1.2k
views
Strange first_time object in rtracklayer import
rtracklayer bigwig import
updated 7.7 years ago by ★ 11k • written 7.7 years ago by ▴ 10
2
votes
3
replies
2.5k
views
import.bed fails on bed file with no scores
rtracklayer import bed files
8.3 years ago jmr • 0
1
vote
4
replies
2.8k
views
rtracklayer::import()-ing .bed.gz files from a URL
rtracklayer import bed
updated 8.3 years ago by ★ 11k • written 8.3 years ago by ▴ 740
11 results • Page 1 of 1
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Comment: 'path' must be string by James W. MacDonald 66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string by cpierce2 • 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest by Robert • 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta by Guido Hooiveld ★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta by Michael Love 42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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