Showing : import • reset
4
votes
5
replies
2.9k
views
time course microarray data ArrayExpress database
R GillespieColin ArrayExpress import TimeSeriesExperiment
updated 2.4 years ago by ▴ 40 • written 3.3 years ago by ▴ 20
0
votes
1
reply
1.2k
views
Import and Analyze 4 GSE12050_GSM304448.gpr microarrays files
.gpr raw Agilent MicroarrayData import
updated 4.3 years ago by 53k • written 4.3 years ago by • 0
0
votes
2
replies
2.0k
views
Error: $ operator is invalid for atomic vectors
import
4.6 years ago Ofelia • 0
0
votes
5
replies
2.8k
views
rtracklayer::import() BigWig issue on windows (solved)
software error BigWig import windows
5.9 years ago lsilva.m • 0
1
vote
2
replies
1.2k
views
Support for import of custom matrix data in the ddCt R package
ddCt import analysis R qRTPCR
updated 6.5 years ago by ▴ 120 • written 6.5 years ago by ▴ 10
3
votes
3
replies
2.0k
views
Bug in rtracklayer::import of amino acid fasta sequences
rtracklayer fasta import Biostrings
updated 7.0 years ago by ★ 11k • written 7.0 years ago by ▴ 120
3
votes
15
replies
4.4k
views
(Big)wig file of complete chromosome
bigwig rtracklayer import granges grangeslist
updated 8.5 years ago by ★ 11k • written 8.5 years ago by ★ 1.5k
3
votes
2
replies
1.7k
views
Import gff from character?
rtracklayer gff gtf import import.gff3
updated 8.6 years ago by 25k • written 8.6 years ago by ▴ 20
2
votes
1
reply
1.6k
views
Strange first_time object in rtracklayer import
rtracklayer bigwig import
updated 9.3 years ago by ★ 11k • written 9.3 years ago by ▴ 10
2
votes
3
replies
3.1k
views
import.bed fails on bed file with no scores
rtracklayer import bed files
9.8 years ago jmr • 0
1
vote
4
replies
3.6k
views
rtracklayer::import()-ing .bed.gz files from a URL
rtracklayer import bed
updated 9.9 years ago by ★ 11k • written 9.9 years ago by ▴ 760
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Answer: Bulk RNAseq analysis for by Gordon Smyth 53k
All three packages allow paired comparisons, where the clone is the "pair". limma moreover allows mixed models (just run `voomLmFit` with `…
Comment: Announcing a New Journal - Bioinformatics Methods and Applications - Now Open fo by a2a2haa • 0
By promoting reproducible analysis, the scientific community can better understand the precise mechanisms that make [Hydrogen inhalation sa…
Answer: Bulk RNAseq analysis for by James W. MacDonald 68k
In my experience, the within-clone variability of differentiated stem cells is often as large or larger than the between-clone variability,…
Comment: Jobs at Ensembl by frostybuddyy • 0
I found your blog "Jobs at Ensembl" quite fascinating! The way you talked about the convergence of bioinformatics and data science in emplo…
Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0
Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…
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Comment: Are transformed values from rlog /vst log2 normalized counts?
Are transformed values from rlog /vst log2 normalized counts?
Answer: Bulk RNAseq analysis for
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
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