Bioconductor VariancePartition

Showing : variancePartition • reset

votes

replies

2.4k

views

dream variancePartition limma differential expression repeated measures

updated 4.6 years ago by Gordon Smyth 50k • written 4.6 years ago by hermidalc ▴ 20

votes

replies

1.7k

views

limma voom variancePartition dream

updated 4.6 years ago by gabriel.hoffman ▴ 110 • written 4.9 years ago by Ben ▴ 50

vote

replies

1.5k

views

DESeq2 variancePartition

13 months ago • updated 12 months ago Weiqian ▴ 10

votes

replies

1.5k

views

variancepartition lme4 mixedmodel

updated 4.6 years ago by gabriel.hoffman ▴ 110 • written 4.7 years ago by c.taylor • 0

vote

replies

1.3k

views

limma variancePartition

updated 2.9 years ago by Gordon Smyth 50k • written 2.9 years ago by jarod ▴ 30

vote

1.3k

views

edgeR limma variancePartition

updated 2.8 years ago by Gordon Smyth 50k • written 2.8 years ago by jackgisby • 0

votes

1.1k

views

variancePartition limma BiocParallel

3.0 years ago Junghoon ▴ 10

votes

1.1k

views

BiocParallel limma variancePartition

3.0 years ago • updated 2.9 years ago Junghoon ▴ 10

votes

replies

961

views

variancePa variancePartition limma-voom dream

updated 14 months ago by Gordon Smyth 50k • written 14 months ago by Le • 0

vote

replies

845

views

variancePartition RNASeqData limma BulkRNAseq RNASeq

updated 5 months ago by Gordon Smyth 50k • written 7 months ago by Gimena • 0

votes

replies

843

views

variancePartition mixedmodel dream

8 months ago hayleyw • 0

vote

replies

792

views

variancePartition limma

3.0 years ago Junghoon ▴ 10

vote

replies

692

views

RNAseq variancePartition edgeR dream

14 months ago • updated 13 months ago DH • 0

vote

replies

609

views

variancePartition BiocParallel

4 months ago hayleyw • 0

votes

replies

451

views

expression variancePartition edgeR

21 months ago Jonathan • 0

vote

replies

220

views

variancePartition

19 days ago • updated 18 days ago Le • 0

16 results • Page 1 of 1

Recent ...

Replies

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Hervé Pagès 16k

Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …

Comment: Help with running egsea() by James W. MacDonald 65k

Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…

Comment: Help with running egsea() by Chris • 0

Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…

Votes

Answer: How to save the DEXSeq results

Answer: minfi support of illumina Infinium methylationEPIC v2.0

Comment: minfi support of illumina Infinium methylationEPIC v2.0

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Help with running egsea()

Awards • All

Popular Question to WouterDeCoster ▴ 130

Scholar to Michael Love 42k

Popular Question to Malcolm Cook ★ 1.6k

Teacher to Gordon Smyth 50k