Biostar Expression

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100

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microarray quantile expression R Normalization

updated 16 days ago by Konstantinos Yeles ▴ 70 • written 24 days ago by mohammedtoufiq91 • 0

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154

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GEO expression GEOquery

updated 15 months ago by Robert Castelo ★ 2.7k • written 15 months ago by lsbew • 0

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476

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RATs RNA-Seq Isoforms DTU expression

updated 2.1 years ago by fruce_ki ▴ 20 • written 2.1 years ago by UserAnonyme • 0

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236

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deseq2 genes expression

updated 2.3 years ago by Michael Love 33k • written 2.3 years ago by UserAnonyme • 0

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738

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rpkm scater calcaverage R expression

updated 2.3 years ago by Aaron Lun ★ 27k • written 2.3 years ago by kushshah ▴ 10

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455

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variance formula expression

updated 2.5 years ago by mikhael.manurung ▴ 230 • written 2.5 years ago by rina ▴ 20

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1.1k

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job sequencing methylation expression Job

6.5 years ago Andy Lynch ▴ 100

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1.1k

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ebayes expression affymetrix pd.hugene.2.0.st limma

updated 6.6 years ago by Gordon Smyth 43k • written 6.6 years ago by Paulo Nuin ▴ 200

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Comment: cant read celfiles using oligo package by scipio04 • 0

i want to get a matrix in order to do population genomic analysis after it's about SNP the answer i received was about the right packa…

Comment: Bootstrap value using ape package and including it in phylogenetic tree by Kevin Blighe 3.2k

Hi, can you please elaborate further on what is the problem by showing a screenshot? Can you please also check the contents of your objects…

Answer: extracting the KEGG pathway for a set of genes by Kevin Blighe 3.2k

Hi Bogdan, I use *KEGGprofile*, but there are other options. The main function is `find_enriched_pathway()`, and it by default accepts…

Answer: cant read celfiles using oligo package by Kevin Blighe 3.2k

Hi, It seems that you already received an answer here: https://support.bioconductor.org/p/9138838/#9138849 What do you want to do wit…

Comment: cel files with affy library by scipio04 • 0

i have same errors with oligo package tho :( i guess something 's wrong with my cel files but idon't know what

Votes

Answer: Is there anyway to replace seqlevels in a txdb

Comment: Compilation fatal error: iostream.h: No such file or directory when installing R

Answer: tximeta countsFromAbundance for downstream analysis

A: plotPCA - how to add labels to a PCA plot

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