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Install old version of DESeq2
apeglm
Install
DESeq2
version
updated 3 hours ago by
Kevin Blighe
★ 4.0k • written 4 months ago by
Asma
• 0
0
votes
2
replies
1.6k
views
PureCN version clashes at GitHub and Bioconductor
version
PureCN
updated 6.0 years ago by
Mike Smith
★ 6.6k • written 6.0 years ago by
twtoal
▴ 10
0
votes
3
replies
4.8k
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BiocManager::install() gives ERROR
version
updated 6.0 years ago by
shepherl
4.2k • written 6.0 years ago by
efratushava
• 0
0
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2
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1.0k
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New release or do I submit as a new package if package update includes a new function
update
new release
version
6.2 years ago
zzrickli
• 0
0
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6
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2.1k
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weird behaviour DESeq2 1.18.1
deseq2
outliers
version
updated 7.7 years ago by
Michael Love
43k • written 7.7 years ago by
aec
▴ 90
0
votes
2
replies
6.9k
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An Installing error that cannot open URL
software error
package installation
version
updated 7.9 years ago by
Martin Morgan
25k • written 7.9 years ago by
syxxcenshi
• 0
2
votes
1
reply
1.5k
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Difference between DESeq2 1.14 and 1.16
deseq2
version
multiple factor design
updated 8.3 years ago by
Gavin Kelly
▴ 690 • written 8.3 years ago by
maksims.fiosins
• 0
2
votes
5
replies
2.3k
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Gene Ontolology and Annotation
version
updated 10.5 years ago by
Marc Carlson
★ 7.2k • written 10.5 years ago by
msp.cse
• 0
3
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3
replies
2.0k
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Using a single R installation with multiple BioConductor library installations - opinions & best practices sought
version
release
library
updated 10.7 years ago by
Hotz, Hans-Rudolf
▴ 400 • written 10.7 years ago by
Malcolm Cook
★ 1.6k
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Answer: How can I correctly use phyloseq with Docker?
by
Kevin Blighe
★ 4.0k
The Bioconductor version must be compatible with the R version. Bioconductor version 3.18 is compatible with R version 4.3. The Dockerfile …
Answer: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace
by
Kevin Blighe
★ 4.0k
Your proposed code is correct and will achieve the desired outcome. The boolean filter expression `IFNg & TNFa | IFNg & IL2 | TNFa & IL2` i…
Answer: Install old version of DESeq2
by
Kevin Blighe
★ 4.0k
The Dockerfile that you have provided is appropriate for installing DESeq2 and apeglm from Bioconductor release 3.10, which corresponds to …
Answer: Guidance Requested on GCN Network Analysis and Module Enrichment in R
by
Kevin Blighe
★ 4.0k
The discrepancy between `final_exp1` and `final_exp2` could arise from several factors, despite matching dimensions. The `identical()` func…
Answer: ORFik: spliced 5utr regions
by
Kevin Blighe
★ 4.0k
Hello Luna. The findUORFs function in ORFik identifies upstream open reading frames by extracting and concatenating the sequences of exo…
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Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Post translational modifications and phosphoproteomics in limpa?
Answer: Identifying differentially expressed genes in individual samples from a large co
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