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9 results • Page 1 of 1

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Comment: dmpFinder for other objects by James W. MacDonald 67k

You are better off using M-values instead of beta values because you are fitting a conventional linear regression, in which case it's bette…

Comment: dmpFinder for other objects by neyousha • 0

Thank you very much James, would you mind explaining why m-values instead of beta values? I have only beta_values available at this point.

Answer: Removing Effect of Covariate in Only a Subset of Samples in a Model Containing A by James W. MacDonald 67k

Do you end up with a column of all zeros when you include menopausal status as a factor? Also, please note that `voomLmFit` is the preferre…

Answer: How to conduct maSigPro analysis with only one condition? by James W. MacDonald 67k

You have a `data.frame` with 9 columns and are specifying a minimum of 20 observations per gene. Since you don't have 20 observations for a…

Comment: Annotation for EPICv2 by nurkenber • 0

Got it Thank you

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Answer: Removing Effect of Covariate in Only a Subset of Samples in a Model Containing A