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limma 2x2 factorial contrast.matrix
limma
weaver
limma
weaver
14.8 years ago
Ben Nota
▴ 10
0
votes
3
replies
1.1k
views
interaction term contrast in Weaver mutant example of LIMMA manual
limma
weaver
limma
weaver
updated 15.4 years ago by
James W. MacDonald
67k • written 15.4 years ago by
Erika Melissari
▴ 250
0
votes
0
replies
1.4k
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subscript out of bounds halting error when Sweaving with weaver And GOstats' HyperGTest
GO
weaver
GO
weaver
16.3 years ago
Elliot Kleiman
▴ 150
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1
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2.2k
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Limma user’s guide example data sets
Microarray
limma
limmaGUI
weaver
Microarray
limma
limmaGUI
weaver
updated 16.7 years ago by
Wang, Jixin
▴ 130 • written 16.7 years ago by
Keith Satterley
▴ 450
0
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1.1k
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Limma user’s guide example data sets
Microarray
limma
weaver
Microarray
limma
weaver
16.7 years ago
Wang, Jixin
▴ 130
0
votes
0
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1.1k
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Limma - using both array and spot weights in lmFit
Genetics
limma
weaver
Genetics
limma
weaver
17.8 years ago
Gordon Smyth
52k
0
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0
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966
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Advice on how to compare two different sources on cDNA
limma
weaver
limma
weaver
18.0 years ago
Marcelo Laia
▴ 450
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1
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924
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limma example Weaver Data
limma
weaver
limma
weaver
19.7 years ago
Gordon Smyth
52k
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3
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1.5k
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limma example Weaver Data
limma
weaver
limma
weaver
updated 19.7 years ago by
Gordon Smyth
52k • written 19.7 years ago by
Wenbin Liu
▴ 100
0
votes
0
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1.1k
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Controls and duplicate correlation
limma
weaver
limma
weaver
19.7 years ago
lepalmer@notes.cc.sunysb.edu
▴ 40
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3
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1.4k
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design in mixed ref and dye-swap experiment
limma
weaver
limma
weaver
updated 19.9 years ago by
Gordon Smyth
52k • written 19.9 years ago by
Silvano Piazza
▴ 50
0
votes
0
replies
2.6k
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limma design matrix
GO
limma
PROcess
weaver
GO
limma
PROcess
weaver
20.9 years ago
Gordon Smyth
52k
0
votes
2
replies
1.2k
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limma missing files
weaver
weaver
updated 21.8 years ago by
Gordon Smyth
52k • written 21.8 years ago by
Dick Beyer
★ 1.4k
13 results • Page
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Answer: Unused arguments error without used arguments in GSVA?
by
Axel Klenk
★ 1.0k
Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…
Answer: Restricting differential binding analysis to only TSS-proximal regions
by
Aaron Lun
★ 28k
Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…
Comment: Sample-specific methylation values using QSEA
by
User3088
• 0
Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…
Comment: input for singR function
by
iamin053
• 0
Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!
Comment: build samplesheet and plot profile
by
yf
• 0
![enter image description here][1] [1]: /media/images/8ea93bd0-bc90-443d-a332-4701f54a
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Unused arguments error without used arguments in GSVA?
Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte
A: Doubt about the "zero expression" genes or genes with no reads at all in the co
Answer: Unable to install nloptr
Answer: ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?
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