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limma 2x2 factorial contrast.matrix
limma
weaver
limma
weaver
14.9 years ago
Ben Nota
▴ 10
0
votes
3
replies
1.2k
views
interaction term contrast in Weaver mutant example of LIMMA manual
limma
weaver
limma
weaver
updated 15.5 years ago by
James W. MacDonald
68k • written 15.5 years ago by
Erika Melissari
▴ 250
0
votes
0
replies
1.4k
views
subscript out of bounds halting error when Sweaving with weaver And GOstats' HyperGTest
GO
weaver
GO
weaver
16.4 years ago
Elliot Kleiman
▴ 150
0
votes
1
reply
2.3k
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Limma user’s guide example data sets
Microarray
limma
limmaGUI
weaver
Microarray
limma
limmaGUI
weaver
updated 16.8 years ago by
Wang, Jixin
▴ 130 • written 16.8 years ago by
Keith Satterley
▴ 450
0
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0
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1.1k
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Limma user’s guide example data sets
Microarray
limma
weaver
Microarray
limma
weaver
16.8 years ago
Wang, Jixin
▴ 130
0
votes
0
replies
1.1k
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Limma - using both array and spot weights in lmFit
Genetics
limma
weaver
Genetics
limma
weaver
17.9 years ago
Gordon Smyth
52k
0
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0
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988
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Advice on how to compare two different sources on cDNA
limma
weaver
limma
weaver
18.1 years ago
Marcelo Laia
▴ 450
0
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1
reply
945
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limma example Weaver Data
limma
weaver
limma
weaver
19.8 years ago
Gordon Smyth
52k
0
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3
replies
1.5k
views
limma example Weaver Data
limma
weaver
limma
weaver
updated 19.8 years ago by
Gordon Smyth
52k • written 19.8 years ago by
Wenbin Liu
▴ 100
0
votes
0
replies
1.1k
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Controls and duplicate correlation
limma
weaver
limma
weaver
19.8 years ago
lepalmer@notes.cc.sunysb.edu
▴ 40
0
votes
3
replies
1.4k
views
design in mixed ref and dye-swap experiment
limma
weaver
limma
weaver
updated 20.0 years ago by
Gordon Smyth
52k • written 20.0 years ago by
Silvano Piazza
▴ 50
0
votes
0
replies
2.6k
views
limma design matrix
GO
limma
PROcess
weaver
GO
limma
PROcess
weaver
21.0 years ago
Gordon Smyth
52k
0
votes
2
replies
1.2k
views
limma missing files
weaver
weaver
updated 21.9 years ago by
Gordon Smyth
52k • written 21.9 years ago by
Dick Beyer
★ 1.4k
13 results • Page
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Comment: error in ChAMP loading file
by
shocked.tick.zyet
• 0
Great troubleshooting steps for ChAMP import issues! "ChAMP methylation data import errors" on [Google Search][1] for similar cases. Header…
Comment: orgDB
by
jenniferping36
• 0
Thanks for the suggestion! I'll check out the resources.
Comment: sesameDataCache is not work properly on my system
by
Samreen
• 0
Any luck with this? I have tried all of the above and it still doesn't work. This is my session info and I'm on a cluster computing environ…
Answer: Using tximport for kallisto aligned TOIL data
by
James W. MacDonald
68k
If you just have the transcript data, you probably don't need (and maybe cannot use) `tximport`. Instead you could just do the naive thing …
Answer: Reading gene expression data in GPR format and converting it to xlsx format
by
James W. MacDonald
68k
Setting aside the inadvisability of putting these data into Excel (and I should point out that these data are not single-cell, but instead …
Votes
Answer: Differential expression of proteins using somascan data
Answer: Surprising behavior for DEXseq dispersion estimate plot?
Answer: Handle zero effective gene length when tximport RSEM results
Handle zero effective gene length when tximport RSEM results
How to remove genes with 0 counts in tximport?
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